Protein–RNA interactions for Protein: Q78RX3

Smim12, Small integral membrane protein 12, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim12Q78RX3 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smim12Q78RX3 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smim12Q78RX3 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smim12Q78RX3 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Smim12Q78RX3 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smim12Q78RX3 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smim12Q78RX3 Gm15165-201ENSMUST00000118140 502 ntBASIC12.83□□□□□ -0.36
Smim12Q78RX3 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smim12Q78RX3 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Smim12Q78RX3 Gm10252-201ENSMUST00000209541 832 ntBASIC12.83□□□□□ -0.36
Smim12Q78RX3 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.83□□□□□ -0.36
Smim12Q78RX3 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smim12Q78RX3 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.83□□□□□ -0.36
Smim12Q78RX3 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smim12Q78RX3 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smim12Q78RX3 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smim12Q78RX3 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smim12Q78RX3 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Smim12Q78RX3 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Smim12Q78RX3 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smim12Q78RX3 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smim12Q78RX3 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smim12Q78RX3 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.82□□□□□ -0.36
Smim12Q78RX3 Sybu-209ENSMUST00000228639 4113 ntBASIC12.82□□□□□ -0.36
Smim12Q78RX3 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smim12Q78RX3 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim12Q78RX3 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim12Q78RX3 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim12Q78RX3 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim12Q78RX3 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Smim12Q78RX3 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim12Q78RX3 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim12Q78RX3 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim12Q78RX3 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Smim12Q78RX3 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.82□□□□□ -0.36
Smim12Q78RX3 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.82□□□□□ -0.36
Smim12Q78RX3 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Smim12Q78RX3 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim12Q78RX3 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Smim12Q78RX3 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Smim12Q78RX3 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.82□□□□□ -0.36
Smim12Q78RX3 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim12Q78RX3 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim12Q78RX3 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.82□□□□□ -0.36
Smim12Q78RX3 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim12Q78RX3 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smim12Q78RX3 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim12Q78RX3 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Smim12Q78RX3 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim12Q78RX3 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim12Q78RX3 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim12Q78RX3 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim12Q78RX3 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim12Q78RX3 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.82□□□□□ -0.36
Smim12Q78RX3 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim12Q78RX3 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smim12Q78RX3 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Smim12Q78RX3 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smim12Q78RX3 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smim12Q78RX3 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smim12Q78RX3 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smim12Q78RX3 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim12Q78RX3 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Smim12Q78RX3 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim12Q78RX3 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim12Q78RX3 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim12Q78RX3 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim12Q78RX3 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Smim12Q78RX3 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim12Q78RX3 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.81□□□□□ -0.36
Smim12Q78RX3 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC12.81□□□□□ -0.36
Smim12Q78RX3 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.81□□□□□ -0.36
Smim12Q78RX3 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.81□□□□□ -0.36
Smim12Q78RX3 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.81□□□□□ -0.36
Smim12Q78RX3 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smim12Q78RX3 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim12Q78RX3 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim12Q78RX3 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim12Q78RX3 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim12Q78RX3 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Smim12Q78RX3 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.81□□□□□ -0.36
Smim12Q78RX3 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim12Q78RX3 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smim12Q78RX3 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim12Q78RX3 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Smim12Q78RX3 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim12Q78RX3 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smim12Q78RX3 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.81□□□□□ -0.36
Smim12Q78RX3 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.81□□□□□ -0.36
Smim12Q78RX3 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim12Q78RX3 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim12Q78RX3 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Smim12Q78RX3 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim12Q78RX3 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim12Q78RX3 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Smim12Q78RX3 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim12Q78RX3 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim12Q78RX3 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim12Q78RX3 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Smim12Q78RX3 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms