Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rif1Q6PR54 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rif1Q6PR54 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rif1Q6PR54 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rif1Q6PR54 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.81□□□□□ -0.36
Rif1Q6PR54 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rif1Q6PR54 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.81□□□□□ -0.36
Rif1Q6PR54 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Rif1Q6PR54 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.81□□□□□ -0.36
Rif1Q6PR54 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.81□□□□□ -0.36
Rif1Q6PR54 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rif1Q6PR54 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rif1Q6PR54 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rif1Q6PR54 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rif1Q6PR54 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rif1Q6PR54 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rif1Q6PR54 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rif1Q6PR54 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Rif1Q6PR54 Gm27701-201ENSMUST00000184498 110 ntBASIC12.8□□□□□ -0.36
Rif1Q6PR54 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rif1Q6PR54 Gm44608-201ENSMUST00000206827 855 ntBASIC12.8□□□□□ -0.36
Rif1Q6PR54 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.8□□□□□ -0.36
Rif1Q6PR54 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.8□□□□□ -0.36
Rif1Q6PR54 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rif1Q6PR54 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rif1Q6PR54 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rif1Q6PR54 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rif1Q6PR54 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rif1Q6PR54 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rif1Q6PR54 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rif1Q6PR54 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rif1Q6PR54 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rif1Q6PR54 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.8□□□□□ -0.36
Rif1Q6PR54 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rif1Q6PR54 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.8□□□□□ -0.36
Rif1Q6PR54 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rif1Q6PR54 Gm5112-201ENSMUST00000204407 2368 ntBASIC12.8□□□□□ -0.36
Rif1Q6PR54 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Rif1Q6PR54 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rif1Q6PR54 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.8□□□□□ -0.36
Rif1Q6PR54 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.8□□□□□ -0.36
Rif1Q6PR54 Gm26917-202ENSMUST00000192833 3329 ntBASIC12.8□□□□□ -0.36
Rif1Q6PR54 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rif1Q6PR54 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.8□□□□□ -0.36
Rif1Q6PR54 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rif1Q6PR54 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.79□□□□□ -0.36
Rif1Q6PR54 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rif1Q6PR54 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.79□□□□□ -0.36
Rif1Q6PR54 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rif1Q6PR54 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rif1Q6PR54 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Rif1Q6PR54 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rif1Q6PR54 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.79□□□□□ -0.36
Rif1Q6PR54 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.79□□□□□ -0.36
Rif1Q6PR54 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Rif1Q6PR54 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rif1Q6PR54 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rif1Q6PR54 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rif1Q6PR54 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rif1Q6PR54 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rif1Q6PR54 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rif1Q6PR54 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rif1Q6PR54 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.79□□□□□ -0.36
Rif1Q6PR54 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rif1Q6PR54 Gm5898-201ENSMUST00000121016 2071 ntBASIC12.79□□□□□ -0.36
Rif1Q6PR54 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rif1Q6PR54 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rif1Q6PR54 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rif1Q6PR54 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rif1Q6PR54 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rif1Q6PR54 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.79□□□□□ -0.36
Rif1Q6PR54 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rif1Q6PR54 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rif1Q6PR54 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.79□□□□□ -0.36
Rif1Q6PR54 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rif1Q6PR54 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rif1Q6PR54 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rif1Q6PR54 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rif1Q6PR54 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rif1Q6PR54 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.79□□□□□ -0.36
Rif1Q6PR54 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.79□□□□□ -0.36
Rif1Q6PR54 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.79□□□□□ -0.36
Rif1Q6PR54 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.79□□□□□ -0.36
Rif1Q6PR54 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.79□□□□□ -0.36
Rif1Q6PR54 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rif1Q6PR54 Gm7399-201ENSMUST00000032395 858 ntBASIC12.79□□□□□ -0.36
Rif1Q6PR54 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rif1Q6PR54 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rif1Q6PR54 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rif1Q6PR54 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rif1Q6PR54 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC12.79□□□□□ -0.36
Rif1Q6PR54 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rif1Q6PR54 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rif1Q6PR54 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rif1Q6PR54 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rif1Q6PR54 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rif1Q6PR54 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rif1Q6PR54 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rif1Q6PR54 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Rif1Q6PR54 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms