Protein–RNA interactions for Protein: Q6PIC6

Atp1a3, Sodium/potassium-transporting ATPase subunit alpha-3, mousemouse

Predictions only

Length 1,013 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp1a3Q6PIC6 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp1a3Q6PIC6 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Atp1a3Q6PIC6 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp1a3Q6PIC6 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp1a3Q6PIC6 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Atp1a3Q6PIC6 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Atp1a3Q6PIC6 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.32■□□□□ 0.36
Atp1a3Q6PIC6 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp1a3Q6PIC6 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Atp1a3Q6PIC6 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp1a3Q6PIC6 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp1a3Q6PIC6 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Atp1a3Q6PIC6 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp1a3Q6PIC6 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp1a3Q6PIC6 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp1a3Q6PIC6 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp1a3Q6PIC6 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp1a3Q6PIC6 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Atp1a3Q6PIC6 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Atp1a3Q6PIC6 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp1a3Q6PIC6 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atp1a3Q6PIC6 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.31■□□□□ 0.36
Atp1a3Q6PIC6 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.31■□□□□ 0.36
Atp1a3Q6PIC6 Gm8242-201ENSMUST00000193029 1420 ntBASIC17.31■□□□□ 0.36
Atp1a3Q6PIC6 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Atp1a3Q6PIC6 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp1a3Q6PIC6 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atp1a3Q6PIC6 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp1a3Q6PIC6 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp1a3Q6PIC6 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Atp1a3Q6PIC6 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atp1a3Q6PIC6 Gm15358-201ENSMUST00000119249 520 ntBASIC17.31■□□□□ 0.36
Atp1a3Q6PIC6 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.31■□□□□ 0.36
Atp1a3Q6PIC6 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp1a3Q6PIC6 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Atp1a3Q6PIC6 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp1a3Q6PIC6 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp1a3Q6PIC6 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp1a3Q6PIC6 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp1a3Q6PIC6 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp1a3Q6PIC6 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp1a3Q6PIC6 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atp1a3Q6PIC6 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp1a3Q6PIC6 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp1a3Q6PIC6 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp1a3Q6PIC6 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Atp1a3Q6PIC6 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp1a3Q6PIC6 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Atp1a3Q6PIC6 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.3■□□□□ 0.36
Atp1a3Q6PIC6 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Atp1a3Q6PIC6 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp1a3Q6PIC6 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.3■□□□□ 0.36
Atp1a3Q6PIC6 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp1a3Q6PIC6 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp1a3Q6PIC6 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp1a3Q6PIC6 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp1a3Q6PIC6 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.3■□□□□ 0.36
Atp1a3Q6PIC6 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Atp1a3Q6PIC6 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Atp1a3Q6PIC6 Gm8318-201ENSMUST00000182954 872 ntBASIC17.3■□□□□ 0.36
Atp1a3Q6PIC6 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Atp1a3Q6PIC6 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.3■□□□□ 0.36
Atp1a3Q6PIC6 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Atp1a3Q6PIC6 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp1a3Q6PIC6 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Atp1a3Q6PIC6 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp1a3Q6PIC6 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp1a3Q6PIC6 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Atp1a3Q6PIC6 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp1a3Q6PIC6 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Atp1a3Q6PIC6 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp1a3Q6PIC6 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp1a3Q6PIC6 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp1a3Q6PIC6 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp1a3Q6PIC6 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp1a3Q6PIC6 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.3■□□□□ 0.36
Atp1a3Q6PIC6 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp1a3Q6PIC6 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
Atp1a3Q6PIC6 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Atp1a3Q6PIC6 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp1a3Q6PIC6 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp1a3Q6PIC6 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp1a3Q6PIC6 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Atp1a3Q6PIC6 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp1a3Q6PIC6 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Atp1a3Q6PIC6 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Atp1a3Q6PIC6 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp1a3Q6PIC6 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp1a3Q6PIC6 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp1a3Q6PIC6 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp1a3Q6PIC6 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp1a3Q6PIC6 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Atp1a3Q6PIC6 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Atp1a3Q6PIC6 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Atp1a3Q6PIC6 Gm27646-201ENSMUST00000183989 110 ntBASIC17.29■□□□□ 0.36
Atp1a3Q6PIC6 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Atp1a3Q6PIC6 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp1a3Q6PIC6 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.29■□□□□ 0.36
Atp1a3Q6PIC6 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp1a3Q6PIC6 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms