Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ShbQ6PD21 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
ShbQ6PD21 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ShbQ6PD21 Gm15678-201ENSMUST00000117573 960 ntBASIC16.3■□□□□ 0.2
ShbQ6PD21 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ShbQ6PD21 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
ShbQ6PD21 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.3■□□□□ 0.2
ShbQ6PD21 Gm27701-201ENSMUST00000184498 110 ntBASIC16.3■□□□□ 0.2
ShbQ6PD21 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC16.3■□□□□ 0.2
ShbQ6PD21 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC16.3■□□□□ 0.2
ShbQ6PD21 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ShbQ6PD21 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC16.3■□□□□ 0.2
ShbQ6PD21 Gm45453-201ENSMUST00000211758 853 ntBASIC16.3■□□□□ 0.2
ShbQ6PD21 Gm19220-201ENSMUST00000222682 803 ntBASIC16.3■□□□□ 0.2
ShbQ6PD21 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ShbQ6PD21 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ShbQ6PD21 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
ShbQ6PD21 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ShbQ6PD21 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ShbQ6PD21 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
ShbQ6PD21 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ShbQ6PD21 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ShbQ6PD21 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ShbQ6PD21 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ShbQ6PD21 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ShbQ6PD21 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.29■□□□□ 0.2
ShbQ6PD21 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ShbQ6PD21 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ShbQ6PD21 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ShbQ6PD21 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ShbQ6PD21 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ShbQ6PD21 Gm9200-201ENSMUST00000118513 1354 ntBASIC16.29■□□□□ 0.2
ShbQ6PD21 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ShbQ6PD21 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ShbQ6PD21 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ShbQ6PD21 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.29■□□□□ 0.2
ShbQ6PD21 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ShbQ6PD21 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ShbQ6PD21 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
ShbQ6PD21 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ShbQ6PD21 Gm45841-201ENSMUST00000207700 164 ntBASIC16.29■□□□□ 0.2
ShbQ6PD21 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.29■□□□□ 0.2
ShbQ6PD21 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ShbQ6PD21 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ShbQ6PD21 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ShbQ6PD21 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
ShbQ6PD21 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ShbQ6PD21 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ShbQ6PD21 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ShbQ6PD21 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ShbQ6PD21 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShbQ6PD21 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShbQ6PD21 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShbQ6PD21 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
ShbQ6PD21 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
ShbQ6PD21 Gm4984-201ENSMUST00000115987 360 ntBASIC16.28■□□□□ 0.2
ShbQ6PD21 Gm12957-201ENSMUST00000117835 377 ntBASIC16.28■□□□□ 0.2
ShbQ6PD21 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC16.28■□□□□ 0.2
ShbQ6PD21 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShbQ6PD21 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.28■□□□□ 0.2
ShbQ6PD21 Gm28911-201ENSMUST00000188837 117 ntBASIC16.28■□□□□ 0.2
ShbQ6PD21 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC16.28■□□□□ 0.2
ShbQ6PD21 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.28■□□□□ 0.2
ShbQ6PD21 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShbQ6PD21 AC165157.4-201ENSMUST00000220587 139 ntBASIC16.28■□□□□ 0.2
ShbQ6PD21 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShbQ6PD21 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShbQ6PD21 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShbQ6PD21 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShbQ6PD21 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShbQ6PD21 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ShbQ6PD21 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShbQ6PD21 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.28■□□□□ 0.2
ShbQ6PD21 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ShbQ6PD21 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShbQ6PD21 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC16.28■□□□□ 0.2
ShbQ6PD21 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShbQ6PD21 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ShbQ6PD21 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ShbQ6PD21 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ShbQ6PD21 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ShbQ6PD21 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
ShbQ6PD21 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ShbQ6PD21 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ShbQ6PD21 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ShbQ6PD21 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ShbQ6PD21 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
ShbQ6PD21 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC16.27■□□□□ 0.2
ShbQ6PD21 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ShbQ6PD21 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC16.27■□□□□ 0.2
ShbQ6PD21 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.27■□□□□ 0.2
ShbQ6PD21 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ShbQ6PD21 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.27■□□□□ 0.2
ShbQ6PD21 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ShbQ6PD21 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
ShbQ6PD21 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
ShbQ6PD21 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ShbQ6PD21 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ShbQ6PD21 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
ShbQ6PD21 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms