Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.85■□□□□ 0.29
Herc4Q6PAV2 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Herc4Q6PAV2 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Herc4Q6PAV2 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.85■□□□□ 0.29
Herc4Q6PAV2 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.85■□□□□ 0.29
Herc4Q6PAV2 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Herc4Q6PAV2 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Herc4Q6PAV2 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.85■□□□□ 0.29
Herc4Q6PAV2 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Herc4Q6PAV2 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Herc4Q6PAV2 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Herc4Q6PAV2 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Herc4Q6PAV2 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Herc4Q6PAV2 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Herc4Q6PAV2 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Herc4Q6PAV2 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Herc4Q6PAV2 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Herc4Q6PAV2 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Herc4Q6PAV2 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Herc4Q6PAV2 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Herc4Q6PAV2 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Herc4Q6PAV2 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.84■□□□□ 0.29
Herc4Q6PAV2 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.84■□□□□ 0.29
Herc4Q6PAV2 Gm9682-201ENSMUST00000197505 556 ntBASIC16.84■□□□□ 0.29
Herc4Q6PAV2 AV026068-213ENSMUST00000223675 1171 ntBASIC16.84■□□□□ 0.29
Herc4Q6PAV2 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Herc4Q6PAV2 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Herc4Q6PAV2 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Herc4Q6PAV2 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Herc4Q6PAV2 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Herc4Q6PAV2 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.84■□□□□ 0.29
Herc4Q6PAV2 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Herc4Q6PAV2 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Herc4Q6PAV2 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Herc4Q6PAV2 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Herc4Q6PAV2 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Herc4Q6PAV2 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Herc4Q6PAV2 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Herc4Q6PAV2 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Herc4Q6PAV2 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Herc4Q6PAV2 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Herc4Q6PAV2 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Herc4Q6PAV2 Gm11764-201ENSMUST00000120221 623 ntBASIC16.83■□□□□ 0.28
Herc4Q6PAV2 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Herc4Q6PAV2 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Herc4Q6PAV2 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.83■□□□□ 0.28
Herc4Q6PAV2 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Herc4Q6PAV2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Herc4Q6PAV2 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Herc4Q6PAV2 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Herc4Q6PAV2 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Herc4Q6PAV2 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Herc4Q6PAV2 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Herc4Q6PAV2 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Herc4Q6PAV2 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Herc4Q6PAV2 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Herc4Q6PAV2 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Herc4Q6PAV2 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.83■□□□□ 0.28
Herc4Q6PAV2 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Herc4Q6PAV2 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Herc4Q6PAV2 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Herc4Q6PAV2 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Herc4Q6PAV2 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Herc4Q6PAV2 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Herc4Q6PAV2 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.82■□□□□ 0.28
Herc4Q6PAV2 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Herc4Q6PAV2 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Herc4Q6PAV2 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Herc4Q6PAV2 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.82■□□□□ 0.28
Herc4Q6PAV2 Gm10499-201ENSMUST00000174094 934 ntBASIC16.82■□□□□ 0.28
Herc4Q6PAV2 Mir5131-201ENSMUST00000175426 93 ntBASIC16.82■□□□□ 0.28
Herc4Q6PAV2 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.82■□□□□ 0.28
Herc4Q6PAV2 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.82■□□□□ 0.28
Herc4Q6PAV2 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.82■□□□□ 0.28
Herc4Q6PAV2 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Herc4Q6PAV2 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Herc4Q6PAV2 Gm7461-201ENSMUST00000058918 827 ntBASIC16.82■□□□□ 0.28
Herc4Q6PAV2 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Herc4Q6PAV2 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.82■□□□□ 0.28
Herc4Q6PAV2 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
Herc4Q6PAV2 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Herc4Q6PAV2 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Herc4Q6PAV2 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.82■□□□□ 0.28
Herc4Q6PAV2 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.82■□□□□ 0.28
Herc4Q6PAV2 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Herc4Q6PAV2 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Herc4Q6PAV2 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Herc4Q6PAV2 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Herc4Q6PAV2 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Herc4Q6PAV2 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Herc4Q6PAV2 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Herc4Q6PAV2 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Herc4Q6PAV2 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Herc4Q6PAV2 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Herc4Q6PAV2 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Herc4Q6PAV2 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Herc4Q6PAV2 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Herc4Q6PAV2 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.81■□□□□ 0.28
Herc4Q6PAV2 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.81■□□□□ 0.28
Herc4Q6PAV2 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms