Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hmgb4Q6P8W9 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Hmgb4Q6P8W9 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Hmgb4Q6P8W9 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hmgb4Q6P8W9 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hmgb4Q6P8W9 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Hmgb4Q6P8W9 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.99■□□□□ 0.15
Hmgb4Q6P8W9 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Hmgb4Q6P8W9 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.99■□□□□ 0.15
Hmgb4Q6P8W9 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hmgb4Q6P8W9 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hmgb4Q6P8W9 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hmgb4Q6P8W9 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.99■□□□□ 0.15
Hmgb4Q6P8W9 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Hmgb4Q6P8W9 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Hmgb4Q6P8W9 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hmgb4Q6P8W9 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hmgb4Q6P8W9 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Hmgb4Q6P8W9 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.99■□□□□ 0.15
Hmgb4Q6P8W9 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hmgb4Q6P8W9 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Hmgb4Q6P8W9 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hmgb4Q6P8W9 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Hmgb4Q6P8W9 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.99■□□□□ 0.15
Hmgb4Q6P8W9 Asic1-205ENSMUST00000228185 1818 ntBASIC15.98■□□□□ 0.15
Hmgb4Q6P8W9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hmgb4Q6P8W9 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hmgb4Q6P8W9 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hmgb4Q6P8W9 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.98■□□□□ 0.15
Hmgb4Q6P8W9 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Hmgb4Q6P8W9 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Hmgb4Q6P8W9 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hmgb4Q6P8W9 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.98■□□□□ 0.15
Hmgb4Q6P8W9 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hmgb4Q6P8W9 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.98■□□□□ 0.15
Hmgb4Q6P8W9 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.98■□□□□ 0.15
Hmgb4Q6P8W9 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.98■□□□□ 0.15
Hmgb4Q6P8W9 Gm9682-201ENSMUST00000197505 556 ntBASIC15.98■□□□□ 0.15
Hmgb4Q6P8W9 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.98■□□□□ 0.15
Hmgb4Q6P8W9 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
Hmgb4Q6P8W9 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Hmgb4Q6P8W9 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Hmgb4Q6P8W9 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hmgb4Q6P8W9 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
Hmgb4Q6P8W9 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hmgb4Q6P8W9 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hmgb4Q6P8W9 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hmgb4Q6P8W9 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hmgb4Q6P8W9 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Hmgb4Q6P8W9 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hmgb4Q6P8W9 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.98■□□□□ 0.15
Hmgb4Q6P8W9 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hmgb4Q6P8W9 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hmgb4Q6P8W9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hmgb4Q6P8W9 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.98■□□□□ 0.15
Hmgb4Q6P8W9 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hmgb4Q6P8W9 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hmgb4Q6P8W9 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hmgb4Q6P8W9 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Hmgb4Q6P8W9 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hmgb4Q6P8W9 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.97■□□□□ 0.15
Hmgb4Q6P8W9 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Hmgb4Q6P8W9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hmgb4Q6P8W9 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hmgb4Q6P8W9 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hmgb4Q6P8W9 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Hmgb4Q6P8W9 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Hmgb4Q6P8W9 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hmgb4Q6P8W9 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.97■□□□□ 0.15
Hmgb4Q6P8W9 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.97■□□□□ 0.15
Hmgb4Q6P8W9 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.97■□□□□ 0.15
Hmgb4Q6P8W9 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Hmgb4Q6P8W9 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Hmgb4Q6P8W9 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hmgb4Q6P8W9 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hmgb4Q6P8W9 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Hmgb4Q6P8W9 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hmgb4Q6P8W9 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Hmgb4Q6P8W9 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hmgb4Q6P8W9 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
Hmgb4Q6P8W9 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hmgb4Q6P8W9 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hmgb4Q6P8W9 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hmgb4Q6P8W9 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hmgb4Q6P8W9 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hmgb4Q6P8W9 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Hmgb4Q6P8W9 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hmgb4Q6P8W9 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.96■□□□□ 0.15
Hmgb4Q6P8W9 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hmgb4Q6P8W9 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hmgb4Q6P8W9 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.96■□□□□ 0.15
Hmgb4Q6P8W9 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.96■□□□□ 0.15
Hmgb4Q6P8W9 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Hmgb4Q6P8W9 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.96■□□□□ 0.15
Hmgb4Q6P8W9 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.96■□□□□ 0.15
Hmgb4Q6P8W9 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Hmgb4Q6P8W9 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Hmgb4Q6P8W9 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hmgb4Q6P8W9 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hmgb4Q6P8W9 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms