Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac4Q6NZM9 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac4Q6NZM9 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.05■□□□□ 0.32
Hdac4Q6NZM9 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac4Q6NZM9 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac4Q6NZM9 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac4Q6NZM9 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.05■□□□□ 0.32
Hdac4Q6NZM9 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac4Q6NZM9 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Hdac4Q6NZM9 Gm10060-201ENSMUST00000212002 111 ntBASIC17.05■□□□□ 0.32
Hdac4Q6NZM9 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac4Q6NZM9 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac4Q6NZM9 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac4Q6NZM9 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Hdac4Q6NZM9 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac4Q6NZM9 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac4Q6NZM9 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac4Q6NZM9 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac4Q6NZM9 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac4Q6NZM9 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac4Q6NZM9 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac4Q6NZM9 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac4Q6NZM9 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac4Q6NZM9 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac4Q6NZM9 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac4Q6NZM9 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Hdac4Q6NZM9 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.04■□□□□ 0.32
Hdac4Q6NZM9 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac4Q6NZM9 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.04■□□□□ 0.32
Hdac4Q6NZM9 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac4Q6NZM9 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac4Q6NZM9 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Hdac4Q6NZM9 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Hdac4Q6NZM9 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac4Q6NZM9 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Hdac4Q6NZM9 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac4Q6NZM9 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac4Q6NZM9 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac4Q6NZM9 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac4Q6NZM9 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.04■□□□□ 0.32
Hdac4Q6NZM9 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac4Q6NZM9 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac4Q6NZM9 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac4Q6NZM9 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac4Q6NZM9 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Hdac4Q6NZM9 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac4Q6NZM9 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac4Q6NZM9 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac4Q6NZM9 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac4Q6NZM9 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac4Q6NZM9 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Hdac4Q6NZM9 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac4Q6NZM9 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hdac4Q6NZM9 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.04■□□□□ 0.32
Hdac4Q6NZM9 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Hdac4Q6NZM9 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.03■□□□□ 0.32
Hdac4Q6NZM9 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac4Q6NZM9 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac4Q6NZM9 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac4Q6NZM9 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac4Q6NZM9 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac4Q6NZM9 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Hdac4Q6NZM9 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.03■□□□□ 0.32
Hdac4Q6NZM9 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac4Q6NZM9 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac4Q6NZM9 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac4Q6NZM9 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.03■□□□□ 0.32
Hdac4Q6NZM9 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.03■□□□□ 0.32
Hdac4Q6NZM9 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.03■□□□□ 0.32
Hdac4Q6NZM9 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
Hdac4Q6NZM9 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac4Q6NZM9 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Hdac4Q6NZM9 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.03■□□□□ 0.32
Hdac4Q6NZM9 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
Hdac4Q6NZM9 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac4Q6NZM9 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Hdac4Q6NZM9 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac4Q6NZM9 Sybu-209ENSMUST00000228639 4113 ntBASIC17.03■□□□□ 0.32
Hdac4Q6NZM9 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Hdac4Q6NZM9 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac4Q6NZM9 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hdac4Q6NZM9 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.03■□□□□ 0.32
Hdac4Q6NZM9 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac4Q6NZM9 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac4Q6NZM9 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac4Q6NZM9 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac4Q6NZM9 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac4Q6NZM9 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac4Q6NZM9 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.02■□□□□ 0.32
Hdac4Q6NZM9 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac4Q6NZM9 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.02■□□□□ 0.32
Hdac4Q6NZM9 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac4Q6NZM9 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac4Q6NZM9 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac4Q6NZM9 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Hdac4Q6NZM9 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac4Q6NZM9 Gm28659-201ENSMUST00000188013 759 ntBASIC17.02■□□□□ 0.32
Hdac4Q6NZM9 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac4Q6NZM9 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Hdac4Q6NZM9 AV026068-213ENSMUST00000223675 1171 ntBASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms