Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.87■□□□□ 0.29
Krt39Q6IFX4 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.87■□□□□ 0.29
Krt39Q6IFX4 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.87■□□□□ 0.29
Krt39Q6IFX4 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.87■□□□□ 0.29
Krt39Q6IFX4 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.87■□□□□ 0.29
Krt39Q6IFX4 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.87■□□□□ 0.29
Krt39Q6IFX4 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Krt39Q6IFX4 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Krt39Q6IFX4 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.87■□□□□ 0.29
Krt39Q6IFX4 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Krt39Q6IFX4 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.87■□□□□ 0.29
Krt39Q6IFX4 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.87■□□□□ 0.29
Krt39Q6IFX4 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Krt39Q6IFX4 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Krt39Q6IFX4 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.87■□□□□ 0.29
Krt39Q6IFX4 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.87■□□□□ 0.29
Krt39Q6IFX4 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Krt39Q6IFX4 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Krt39Q6IFX4 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Krt39Q6IFX4 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Krt39Q6IFX4 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Krt39Q6IFX4 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Krt39Q6IFX4 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Krt39Q6IFX4 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Krt39Q6IFX4 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Krt39Q6IFX4 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Krt39Q6IFX4 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.86■□□□□ 0.29
Krt39Q6IFX4 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
Krt39Q6IFX4 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
Krt39Q6IFX4 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
Krt39Q6IFX4 Gm27867-201ENSMUST00000184778 125 ntBASIC16.86■□□□□ 0.29
Krt39Q6IFX4 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.86■□□□□ 0.29
Krt39Q6IFX4 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Krt39Q6IFX4 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Krt39Q6IFX4 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Krt39Q6IFX4 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Krt39Q6IFX4 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Krt39Q6IFX4 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Krt39Q6IFX4 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Krt39Q6IFX4 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Krt39Q6IFX4 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Krt39Q6IFX4 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Krt39Q6IFX4 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Krt39Q6IFX4 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Krt39Q6IFX4 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Krt39Q6IFX4 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Krt39Q6IFX4 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Krt39Q6IFX4 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Krt39Q6IFX4 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Krt39Q6IFX4 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Krt39Q6IFX4 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Krt39Q6IFX4 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Krt39Q6IFX4 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.85■□□□□ 0.29
Krt39Q6IFX4 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Krt39Q6IFX4 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
Krt39Q6IFX4 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Krt39Q6IFX4 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Krt39Q6IFX4 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Krt39Q6IFX4 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Krt39Q6IFX4 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Krt39Q6IFX4 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Krt39Q6IFX4 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.85■□□□□ 0.29
Krt39Q6IFX4 Gm15165-201ENSMUST00000118140 502 ntBASIC16.85■□□□□ 0.29
Krt39Q6IFX4 Gm9103-201ENSMUST00000119371 405 ntBASIC16.85■□□□□ 0.29
Krt39Q6IFX4 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.85■□□□□ 0.29
Krt39Q6IFX4 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Krt39Q6IFX4 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.85■□□□□ 0.29
Krt39Q6IFX4 Gm7506-201ENSMUST00000207758 815 ntBASIC16.85■□□□□ 0.29
Krt39Q6IFX4 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.85■□□□□ 0.29
Krt39Q6IFX4 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Krt39Q6IFX4 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Krt39Q6IFX4 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Krt39Q6IFX4 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Krt39Q6IFX4 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Krt39Q6IFX4 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.85■□□□□ 0.29
Krt39Q6IFX4 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Krt39Q6IFX4 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Krt39Q6IFX4 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Krt39Q6IFX4 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Krt39Q6IFX4 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.84■□□□□ 0.29
Krt39Q6IFX4 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Krt39Q6IFX4 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Krt39Q6IFX4 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Krt39Q6IFX4 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Krt39Q6IFX4 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Krt39Q6IFX4 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Krt39Q6IFX4 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Krt39Q6IFX4 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Krt39Q6IFX4 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Krt39Q6IFX4 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Krt39Q6IFX4 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Krt39Q6IFX4 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Krt39Q6IFX4 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Krt39Q6IFX4 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.84■□□□□ 0.29
Krt39Q6IFX4 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.84■□□□□ 0.29
Krt39Q6IFX4 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Krt39Q6IFX4 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.84■□□□□ 0.29
Krt39Q6IFX4 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Krt39Q6IFX4 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Krt39Q6IFX4 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms