Protein–RNA interactions for Protein: Q6A009

Ltn1, E3 ubiquitin-protein ligase listerin, mousemouse

Predictions only

Length 1,767 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ltn1Q6A009 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC17.86■□□□□ 0.45
Ltn1Q6A009 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ltn1Q6A009 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ltn1Q6A009 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC17.86■□□□□ 0.45
Ltn1Q6A009 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ltn1Q6A009 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Ltn1Q6A009 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ltn1Q6A009 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ltn1Q6A009 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Ltn1Q6A009 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ltn1Q6A009 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Ltn1Q6A009 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ltn1Q6A009 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ltn1Q6A009 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Ltn1Q6A009 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ltn1Q6A009 Gm12138-201ENSMUST00000122180 951 ntBASIC17.85■□□□□ 0.45
Ltn1Q6A009 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ltn1Q6A009 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ltn1Q6A009 Gm27838-201ENSMUST00000184829 128 ntBASIC17.85■□□□□ 0.45
Ltn1Q6A009 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ltn1Q6A009 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ltn1Q6A009 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ltn1Q6A009 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.85■□□□□ 0.45
Ltn1Q6A009 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ltn1Q6A009 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ltn1Q6A009 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ltn1Q6A009 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ltn1Q6A009 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ltn1Q6A009 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Ltn1Q6A009 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ltn1Q6A009 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ltn1Q6A009 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ltn1Q6A009 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ltn1Q6A009 Gm4204-201ENSMUST00000110798 1231 ntBASIC17.84■□□□□ 0.45
Ltn1Q6A009 Gm42612-201ENSMUST00000197986 623 ntBASIC17.84■□□□□ 0.45
Ltn1Q6A009 Gm43170-201ENSMUST00000199827 612 ntBASIC17.84■□□□□ 0.45
Ltn1Q6A009 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ltn1Q6A009 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ltn1Q6A009 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ltn1Q6A009 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ltn1Q6A009 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.84■□□□□ 0.45
Ltn1Q6A009 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Ltn1Q6A009 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Ltn1Q6A009 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ltn1Q6A009 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ltn1Q6A009 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.84■□□□□ 0.45
Ltn1Q6A009 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.84■□□□□ 0.45
Ltn1Q6A009 Gm5320-201ENSMUST00000207163 1519 ntBASIC17.84■□□□□ 0.45
Ltn1Q6A009 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Ltn1Q6A009 Gm14042-201ENSMUST00000120139 833 ntBASIC17.84■□□□□ 0.45
Ltn1Q6A009 Gm3436-201ENSMUST00000179930 840 ntBASIC17.84■□□□□ 0.45
Ltn1Q6A009 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ltn1Q6A009 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ltn1Q6A009 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ltn1Q6A009 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ltn1Q6A009 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ltn1Q6A009 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ltn1Q6A009 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ltn1Q6A009 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.83■□□□□ 0.45
Ltn1Q6A009 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ltn1Q6A009 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ltn1Q6A009 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ltn1Q6A009 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
Ltn1Q6A009 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ltn1Q6A009 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ltn1Q6A009 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ltn1Q6A009 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ltn1Q6A009 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ltn1Q6A009 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ltn1Q6A009 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ltn1Q6A009 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ltn1Q6A009 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ltn1Q6A009 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Ltn1Q6A009 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ltn1Q6A009 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ltn1Q6A009 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ltn1Q6A009 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC17.82■□□□□ 0.44
Ltn1Q6A009 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ltn1Q6A009 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ltn1Q6A009 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ltn1Q6A009 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Ltn1Q6A009 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ltn1Q6A009 Gm14127-201ENSMUST00000117906 678 ntBASIC17.82■□□□□ 0.44
Ltn1Q6A009 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ltn1Q6A009 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Ltn1Q6A009 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC17.82■□□□□ 0.44
Ltn1Q6A009 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ltn1Q6A009 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ltn1Q6A009 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.82■□□□□ 0.44
Ltn1Q6A009 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.82■□□□□ 0.44
Ltn1Q6A009 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ltn1Q6A009 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Ltn1Q6A009 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ltn1Q6A009 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ltn1Q6A009 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ltn1Q6A009 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Ltn1Q6A009 Gm15653-201ENSMUST00000119247 907 ntBASIC17.81■□□□□ 0.44
Ltn1Q6A009 Gm6222-201ENSMUST00000120787 396 ntBASIC17.81■□□□□ 0.44
Ltn1Q6A009 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.81■□□□□ 0.44
Ltn1Q6A009 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms