Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn9aQ62205 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn9aQ62205 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn9aQ62205 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn9aQ62205 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn9aQ62205 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.73■□□□□ 0.43
Scn9aQ62205 Gm9522-201ENSMUST00000182394 926 ntBASIC17.73■□□□□ 0.43
Scn9aQ62205 Gm2451-201ENSMUST00000199447 999 ntBASIC17.73■□□□□ 0.43
Scn9aQ62205 Gm10290-201ENSMUST00000200451 999 ntBASIC17.73■□□□□ 0.43
Scn9aQ62205 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn9aQ62205 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn9aQ62205 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn9aQ62205 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Scn9aQ62205 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn9aQ62205 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.72■□□□□ 0.43
Scn9aQ62205 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC17.72■□□□□ 0.43
Scn9aQ62205 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn9aQ62205 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn9aQ62205 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn9aQ62205 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn9aQ62205 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scn9aQ62205 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC17.72■□□□□ 0.43
Scn9aQ62205 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC17.72■□□□□ 0.43
Scn9aQ62205 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC17.72■□□□□ 0.43
Scn9aQ62205 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn9aQ62205 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn9aQ62205 Gm15823-201ENSMUST00000064305 670 ntBASIC17.72■□□□□ 0.43
Scn9aQ62205 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scn9aQ62205 App-207ENSMUST00000227737 2827 ntBASIC17.72■□□□□ 0.43
Scn9aQ62205 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn9aQ62205 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn9aQ62205 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn9aQ62205 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn9aQ62205 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.72■□□□□ 0.43
Scn9aQ62205 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Scn9aQ62205 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn9aQ62205 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn9aQ62205 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC17.71■□□□□ 0.43
Scn9aQ62205 Mir1897-201ENSMUST00000122581 272 ntBASIC17.71■□□□□ 0.43
Scn9aQ62205 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC17.71■□□□□ 0.43
Scn9aQ62205 Mir6420-201ENSMUST00000185032 102 ntBASIC17.71■□□□□ 0.43
Scn9aQ62205 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn9aQ62205 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn9aQ62205 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn9aQ62205 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Scn9aQ62205 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.71■□□□□ 0.43
Scn9aQ62205 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn9aQ62205 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.71■□□□□ 0.43
Scn9aQ62205 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn9aQ62205 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn9aQ62205 Dancr-204ENSMUST00000132389 2347 ntBASIC17.71■□□□□ 0.43
Scn9aQ62205 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn9aQ62205 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC17.71■□□□□ 0.43
Scn9aQ62205 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.71■□□□□ 0.43
Scn9aQ62205 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn9aQ62205 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Scn9aQ62205 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn9aQ62205 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn9aQ62205 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC17.71■□□□□ 0.43
Scn9aQ62205 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn9aQ62205 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn9aQ62205 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn9aQ62205 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn9aQ62205 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Scn9aQ62205 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn9aQ62205 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scn9aQ62205 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Scn9aQ62205 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn9aQ62205 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn9aQ62205 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn9aQ62205 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn9aQ62205 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn9aQ62205 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scn9aQ62205 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Scn9aQ62205 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn9aQ62205 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scn9aQ62205 Gm16476-201ENSMUST00000221544 139 ntBASIC17.7■□□□□ 0.42
Scn9aQ62205 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn9aQ62205 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scn9aQ62205 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn9aQ62205 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn9aQ62205 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn9aQ62205 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scn9aQ62205 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn9aQ62205 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn9aQ62205 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn9aQ62205 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn9aQ62205 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.7■□□□□ 0.42
Scn9aQ62205 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scn9aQ62205 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.7■□□□□ 0.42
Scn9aQ62205 Gm17150-201ENSMUST00000165577 381 ntBASIC17.7■□□□□ 0.42
Scn9aQ62205 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.7■□□□□ 0.42
Scn9aQ62205 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scn9aQ62205 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC17.7■□□□□ 0.42
Scn9aQ62205 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn9aQ62205 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn9aQ62205 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn9aQ62205 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Scn9aQ62205 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.69■□□□□ 0.42
Scn9aQ62205 Celf4-206ENSMUST00000224553 1729 ntBASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms