Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.15□□□□□ -0.14
VcanQ62059 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VcanQ62059 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VcanQ62059 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VcanQ62059 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VcanQ62059 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VcanQ62059 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.15□□□□□ -0.14
VcanQ62059 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VcanQ62059 Gm6244-201ENSMUST00000178732 841 ntBASIC14.15□□□□□ -0.14
VcanQ62059 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VcanQ62059 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VcanQ62059 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
VcanQ62059 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VcanQ62059 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VcanQ62059 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
VcanQ62059 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VcanQ62059 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VcanQ62059 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VcanQ62059 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VcanQ62059 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VcanQ62059 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VcanQ62059 Gm28760-201ENSMUST00000185995 736 ntBASIC14.14□□□□□ -0.15
VcanQ62059 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.14□□□□□ -0.15
VcanQ62059 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.14□□□□□ -0.15
VcanQ62059 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VcanQ62059 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VcanQ62059 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VcanQ62059 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.14□□□□□ -0.15
VcanQ62059 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VcanQ62059 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
VcanQ62059 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
VcanQ62059 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VcanQ62059 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.14□□□□□ -0.15
VcanQ62059 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VcanQ62059 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.14□□□□□ -0.15
VcanQ62059 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.14□□□□□ -0.15
VcanQ62059 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VcanQ62059 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VcanQ62059 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
VcanQ62059 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VcanQ62059 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VcanQ62059 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VcanQ62059 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VcanQ62059 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.14□□□□□ -0.15
VcanQ62059 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.14□□□□□ -0.15
VcanQ62059 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.14□□□□□ -0.15
VcanQ62059 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.14□□□□□ -0.15
VcanQ62059 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VcanQ62059 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VcanQ62059 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VcanQ62059 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
VcanQ62059 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
VcanQ62059 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VcanQ62059 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC14.13□□□□□ -0.15
VcanQ62059 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
VcanQ62059 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.13□□□□□ -0.15
VcanQ62059 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.13□□□□□ -0.15
VcanQ62059 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.13□□□□□ -0.15
VcanQ62059 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VcanQ62059 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VcanQ62059 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VcanQ62059 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VcanQ62059 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VcanQ62059 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VcanQ62059 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VcanQ62059 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VcanQ62059 Gm11543-201ENSMUST00000120758 370 ntBASIC14.13□□□□□ -0.15
VcanQ62059 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VcanQ62059 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
VcanQ62059 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VcanQ62059 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VcanQ62059 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
VcanQ62059 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VcanQ62059 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
VcanQ62059 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.13□□□□□ -0.15
VcanQ62059 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VcanQ62059 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VcanQ62059 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VcanQ62059 Gm12390-201ENSMUST00000117897 397 ntBASIC14.13□□□□□ -0.15
VcanQ62059 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
VcanQ62059 Gm9719-201ENSMUST00000162765 543 ntBASIC14.13□□□□□ -0.15
VcanQ62059 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VcanQ62059 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VcanQ62059 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VcanQ62059 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VcanQ62059 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VcanQ62059 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
VcanQ62059 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
VcanQ62059 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VcanQ62059 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.12□□□□□ -0.15
VcanQ62059 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.12□□□□□ -0.15
VcanQ62059 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VcanQ62059 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VcanQ62059 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.12□□□□□ -0.15
VcanQ62059 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.12□□□□□ -0.15
VcanQ62059 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VcanQ62059 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VcanQ62059 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VcanQ62059 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VcanQ62059 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms