Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.32□□□□□ -0.12
Sox17Q61473 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Sox17Q61473 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.32□□□□□ -0.12
Sox17Q61473 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox17Q61473 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox17Q61473 Gm9987-201ENSMUST00000069768 567 ntBASIC14.32□□□□□ -0.12
Sox17Q61473 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Sox17Q61473 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox17Q61473 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox17Q61473 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox17Q61473 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox17Q61473 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox17Q61473 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Sox17Q61473 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.31□□□□□ -0.12
Sox17Q61473 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox17Q61473 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox17Q61473 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox17Q61473 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox17Q61473 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox17Q61473 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox17Q61473 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Sox17Q61473 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox17Q61473 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox17Q61473 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sox17Q61473 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.31□□□□□ -0.12
Sox17Q61473 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sox17Q61473 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.31□□□□□ -0.12
Sox17Q61473 Gm27389-201ENSMUST00000183622 195 ntBASIC14.31□□□□□ -0.12
Sox17Q61473 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.31□□□□□ -0.12
Sox17Q61473 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.31□□□□□ -0.12
Sox17Q61473 Gm18959-201ENSMUST00000208954 655 ntBASIC14.31□□□□□ -0.12
Sox17Q61473 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sox17Q61473 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox17Q61473 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sox17Q61473 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox17Q61473 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.31□□□□□ -0.12
Sox17Q61473 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox17Q61473 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox17Q61473 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox17Q61473 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox17Q61473 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Sox17Q61473 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox17Q61473 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox17Q61473 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox17Q61473 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox17Q61473 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox17Q61473 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox17Q61473 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox17Q61473 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox17Q61473 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox17Q61473 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox17Q61473 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sox17Q61473 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox17Q61473 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Sox17Q61473 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox17Q61473 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Sox17Q61473 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.3□□□□□ -0.12
Sox17Q61473 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sox17Q61473 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox17Q61473 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Sox17Q61473 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox17Q61473 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Sox17Q61473 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox17Q61473 Gm22240-201ENSMUST00000175225 82 ntBASIC14.3□□□□□ -0.12
Sox17Q61473 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.3□□□□□ -0.12
Sox17Q61473 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Sox17Q61473 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Sox17Q61473 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox17Q61473 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Sox17Q61473 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Sox17Q61473 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox17Q61473 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Sox17Q61473 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Sox17Q61473 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Sox17Q61473 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox17Q61473 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox17Q61473 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox17Q61473 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox17Q61473 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Sox17Q61473 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox17Q61473 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Sox17Q61473 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sox17Q61473 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.29□□□□□ -0.12
Sox17Q61473 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.29□□□□□ -0.12
Sox17Q61473 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox17Q61473 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox17Q61473 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox17Q61473 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox17Q61473 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox17Q61473 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox17Q61473 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox17Q61473 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox17Q61473 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox17Q61473 Mir770-201ENSMUST00000103252 94 ntBASIC14.29□□□□□ -0.12
Sox17Q61473 Gm11355-201ENSMUST00000121120 306 ntBASIC14.29□□□□□ -0.12
Sox17Q61473 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox17Q61473 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.29□□□□□ -0.12
Sox17Q61473 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Sox17Q61473 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox17Q61473 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms