Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccne1Q61457 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccne1Q61457 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccne1Q61457 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccne1Q61457 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC19.77■□□□□ 0.76
Ccne1Q61457 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ccne1Q61457 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
Ccne1Q61457 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ccne1Q61457 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ccne1Q61457 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccne1Q61457 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccne1Q61457 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ccne1Q61457 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Ccne1Q61457 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccne1Q61457 Gm13015-201ENSMUST00000118674 204 ntBASIC19.76■□□□□ 0.75
Ccne1Q61457 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccne1Q61457 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccne1Q61457 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccne1Q61457 Gm18737-201ENSMUST00000173594 937 ntBASIC19.76■□□□□ 0.75
Ccne1Q61457 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ccne1Q61457 Gm29541-201ENSMUST00000191351 678 ntBASIC19.76■□□□□ 0.75
Ccne1Q61457 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccne1Q61457 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccne1Q61457 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccne1Q61457 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccne1Q61457 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccne1Q61457 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ccne1Q61457 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccne1Q61457 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccne1Q61457 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
Ccne1Q61457 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ccne1Q61457 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC19.75■□□□□ 0.75
Ccne1Q61457 Gm9824-201ENSMUST00000178707 561 ntBASIC19.75■□□□□ 0.75
Ccne1Q61457 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC19.75■□□□□ 0.75
Ccne1Q61457 CT025535.1-201ENSMUST00000227172 491 ntBASIC19.75■□□□□ 0.75
Ccne1Q61457 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccne1Q61457 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccne1Q61457 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccne1Q61457 Gm13233-201ENSMUST00000118760 1443 ntBASIC19.75■□□□□ 0.75
Ccne1Q61457 Gm13244-201ENSMUST00000118855 1446 ntBASIC19.75■□□□□ 0.75
Ccne1Q61457 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccne1Q61457 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccne1Q61457 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccne1Q61457 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Ccne1Q61457 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccne1Q61457 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccne1Q61457 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Ccne1Q61457 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccne1Q61457 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Ccne1Q61457 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccne1Q61457 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC19.74■□□□□ 0.75
Ccne1Q61457 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccne1Q61457 Gm27920-201ENSMUST00000183953 96 ntBASIC19.74■□□□□ 0.75
Ccne1Q61457 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccne1Q61457 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC19.74■□□□□ 0.75
Ccne1Q61457 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Ccne1Q61457 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccne1Q61457 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccne1Q61457 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccne1Q61457 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccne1Q61457 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccne1Q61457 Gm42934-201ENSMUST00000196920 1345 ntBASIC19.74■□□□□ 0.75
Ccne1Q61457 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccne1Q61457 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccne1Q61457 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ccne1Q61457 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccne1Q61457 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccne1Q61457 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC19.73■□□□□ 0.75
Ccne1Q61457 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccne1Q61457 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC19.73■□□□□ 0.75
Ccne1Q61457 Klk2-ps-201ENSMUST00000205342 571 ntBASIC19.73■□□□□ 0.75
Ccne1Q61457 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC19.73■□□□□ 0.75
Ccne1Q61457 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC19.73■□□□□ 0.75
Ccne1Q61457 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccne1Q61457 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccne1Q61457 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccne1Q61457 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccne1Q61457 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccne1Q61457 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccne1Q61457 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC19.73■□□□□ 0.75
Ccne1Q61457 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ccne1Q61457 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccne1Q61457 AC131743.5-201ENSMUST00000220775 1618 ntBASIC19.73■□□□□ 0.75
Ccne1Q61457 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccne1Q61457 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccne1Q61457 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccne1Q61457 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Ccne1Q61457 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
Ccne1Q61457 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccne1Q61457 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC19.72■□□□□ 0.75
Ccne1Q61457 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccne1Q61457 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Ccne1Q61457 Gm15593-201ENSMUST00000122085 1008 ntBASIC19.72■□□□□ 0.75
Ccne1Q61457 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccne1Q61457 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccne1Q61457 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Ccne1Q61457 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccne1Q61457 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccne1Q61457 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccne1Q61457 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms