Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC18.9■□□□□ 0.62
Irf9Q61179 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Irf9Q61179 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Irf9Q61179 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Irf9Q61179 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Irf9Q61179 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Irf9Q61179 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Irf9Q61179 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Irf9Q61179 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Irf9Q61179 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Irf9Q61179 Gm43474-201ENSMUST00000196415 774 ntBASIC18.89■□□□□ 0.61
Irf9Q61179 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC18.89■□□□□ 0.61
Irf9Q61179 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Irf9Q61179 Gm5312-201ENSMUST00000203728 547 ntBASIC18.89■□□□□ 0.61
Irf9Q61179 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Irf9Q61179 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Irf9Q61179 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
Irf9Q61179 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Irf9Q61179 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Irf9Q61179 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Irf9Q61179 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Irf9Q61179 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Irf9Q61179 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Irf9Q61179 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Irf9Q61179 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Irf9Q61179 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Irf9Q61179 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Irf9Q61179 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Irf9Q61179 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.89■□□□□ 0.61
Irf9Q61179 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Irf9Q61179 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.88■□□□□ 0.61
Irf9Q61179 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Irf9Q61179 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Irf9Q61179 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Irf9Q61179 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Irf9Q61179 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Irf9Q61179 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.88■□□□□ 0.61
Irf9Q61179 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Irf9Q61179 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Irf9Q61179 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC18.88■□□□□ 0.61
Irf9Q61179 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Irf9Q61179 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC18.88■□□□□ 0.61
Irf9Q61179 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Irf9Q61179 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Irf9Q61179 Gm43125-201ENSMUST00000201724 730 ntBASIC18.88■□□□□ 0.61
Irf9Q61179 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Irf9Q61179 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Irf9Q61179 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Irf9Q61179 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Irf9Q61179 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Irf9Q61179 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Irf9Q61179 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Irf9Q61179 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Irf9Q61179 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Irf9Q61179 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Irf9Q61179 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.87■□□□□ 0.61
Irf9Q61179 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Irf9Q61179 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Irf9Q61179 Gm6973-201ENSMUST00000117080 721 ntBASIC18.87■□□□□ 0.61
Irf9Q61179 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Irf9Q61179 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Irf9Q61179 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Irf9Q61179 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC18.87■□□□□ 0.61
Irf9Q61179 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC18.87■□□□□ 0.61
Irf9Q61179 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC18.87■□□□□ 0.61
Irf9Q61179 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Irf9Q61179 AC154621.1-201ENSMUST00000226155 1119 ntBASIC18.87■□□□□ 0.61
Irf9Q61179 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Irf9Q61179 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Irf9Q61179 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Irf9Q61179 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Irf9Q61179 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Irf9Q61179 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Irf9Q61179 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.87■□□□□ 0.61
Irf9Q61179 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Irf9Q61179 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Irf9Q61179 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Irf9Q61179 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC18.87■□□□□ 0.61
Irf9Q61179 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Irf9Q61179 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Irf9Q61179 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.86■□□□□ 0.61
Irf9Q61179 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Irf9Q61179 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Irf9Q61179 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Irf9Q61179 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Irf9Q61179 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Irf9Q61179 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Irf9Q61179 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.86■□□□□ 0.61
Irf9Q61179 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Irf9Q61179 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC18.86■□□□□ 0.61
Irf9Q61179 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Irf9Q61179 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Irf9Q61179 Gm6018-201ENSMUST00000216090 1306 ntBASIC18.86■□□□□ 0.61
Irf9Q61179 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Irf9Q61179 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Irf9Q61179 Gm15593-201ENSMUST00000122085 1008 ntBASIC18.86■□□□□ 0.61
Irf9Q61179 Gm12017-201ENSMUST00000122453 1003 ntBASIC18.86■□□□□ 0.61
Irf9Q61179 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Irf9Q61179 Gm43767-201ENSMUST00000198933 381 ntBASIC18.86■□□□□ 0.61
Irf9Q61179 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms