Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Vps54Q5SPW0 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC18.28■□□□□ 0.52
Vps54Q5SPW0 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps54Q5SPW0 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps54Q5SPW0 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps54Q5SPW0 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps54Q5SPW0 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps54Q5SPW0 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Vps54Q5SPW0 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps54Q5SPW0 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
Vps54Q5SPW0 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps54Q5SPW0 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Vps54Q5SPW0 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps54Q5SPW0 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps54Q5SPW0 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps54Q5SPW0 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC18.28■□□□□ 0.52
Vps54Q5SPW0 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps54Q5SPW0 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps54Q5SPW0 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps54Q5SPW0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps54Q5SPW0 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps54Q5SPW0 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Vps54Q5SPW0 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps54Q5SPW0 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Vps54Q5SPW0 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps54Q5SPW0 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Vps54Q5SPW0 Gm8242-201ENSMUST00000193029 1420 ntBASIC18.27■□□□□ 0.52
Vps54Q5SPW0 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Vps54Q5SPW0 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
Vps54Q5SPW0 Gm12008-201ENSMUST00000117791 755 ntBASIC18.27■□□□□ 0.52
Vps54Q5SPW0 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC18.27■□□□□ 0.52
Vps54Q5SPW0 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC18.27■□□□□ 0.52
Vps54Q5SPW0 AC154572.2-201ENSMUST00000225105 997 ntBASIC18.27■□□□□ 0.52
Vps54Q5SPW0 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps54Q5SPW0 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps54Q5SPW0 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Vps54Q5SPW0 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps54Q5SPW0 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vps54Q5SPW0 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps54Q5SPW0 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps54Q5SPW0 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps54Q5SPW0 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps54Q5SPW0 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vps54Q5SPW0 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vps54Q5SPW0 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Vps54Q5SPW0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps54Q5SPW0 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vps54Q5SPW0 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps54Q5SPW0 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Vps54Q5SPW0 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC18.26■□□□□ 0.51
Vps54Q5SPW0 Gm12892-201ENSMUST00000117367 1146 ntBASIC18.26■□□□□ 0.51
Vps54Q5SPW0 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.26■□□□□ 0.51
Vps54Q5SPW0 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps54Q5SPW0 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps54Q5SPW0 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Vps54Q5SPW0 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps54Q5SPW0 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps54Q5SPW0 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vps54Q5SPW0 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps54Q5SPW0 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Vps54Q5SPW0 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps54Q5SPW0 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Vps54Q5SPW0 Tfap2a-203ENSMUST00000223869 2037 ntBASIC18.25■□□□□ 0.51
Vps54Q5SPW0 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps54Q5SPW0 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps54Q5SPW0 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Vps54Q5SPW0 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps54Q5SPW0 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC18.25■□□□□ 0.51
Vps54Q5SPW0 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps54Q5SPW0 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps54Q5SPW0 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Vps54Q5SPW0 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC18.25■□□□□ 0.51
Vps54Q5SPW0 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC18.25■□□□□ 0.51
Vps54Q5SPW0 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps54Q5SPW0 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps54Q5SPW0 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps54Q5SPW0 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vps54Q5SPW0 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps54Q5SPW0 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Vps54Q5SPW0 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps54Q5SPW0 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps54Q5SPW0 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps54Q5SPW0 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps54Q5SPW0 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.25■□□□□ 0.51
Vps54Q5SPW0 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Vps54Q5SPW0 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps54Q5SPW0 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.24■□□□□ 0.51
Vps54Q5SPW0 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Vps54Q5SPW0 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps54Q5SPW0 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps54Q5SPW0 Gm11839-201ENSMUST00000120647 1953 ntBASIC18.24■□□□□ 0.51
Vps54Q5SPW0 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps54Q5SPW0 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps54Q5SPW0 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps54Q5SPW0 Asic1-205ENSMUST00000228185 1818 ntBASIC18.24■□□□□ 0.51
Vps54Q5SPW0 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps54Q5SPW0 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Vps54Q5SPW0 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps54Q5SPW0 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.24■□□□□ 0.51
Vps54Q5SPW0 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms