Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Gm7292-201ENSMUST00000194706 2527 ntBASIC13.36□□□□□ -0.27
Trav6-2Q5R1I4 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-2Q5R1I4 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Trav6-2Q5R1I4 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Gm22065-201ENSMUST00000103753 110 ntBASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Gm22066-201ENSMUST00000103761 110 ntBASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Gm24932-201ENSMUST00000103763 110 ntBASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Gm24115-201ENSMUST00000103799 110 ntBASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Gm22190-201ENSMUST00000103827 110 ntBASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Gm22191-201ENSMUST00000103831 110 ntBASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Gm24721-201ENSMUST00000103849 110 ntBASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Gm28018-201ENSMUST00000103869 110 ntBASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Gm26399-201ENSMUST00000103937 110 ntBASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Gm18737-201ENSMUST00000173594 937 ntBASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Gm25349-201ENSMUST00000177728 110 ntBASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Gm23616-201ENSMUST00000177797 110 ntBASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Gm25871-201ENSMUST00000177816 110 ntBASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Gm24752-201ENSMUST00000178240 110 ntBASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Gm24496-201ENSMUST00000178287 110 ntBASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Gm25649-201ENSMUST00000178476 110 ntBASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Gm25548-201ENSMUST00000178681 110 ntBASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Gm23147-201ENSMUST00000178841 110 ntBASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Gm26095-201ENSMUST00000179270 110 ntBASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Gm22171-201ENSMUST00000179283 110 ntBASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Gm23936-201ENSMUST00000179354 110 ntBASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Gm22619-201ENSMUST00000179516 110 ntBASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Gm25255-201ENSMUST00000179579 110 ntBASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Gm24755-201ENSMUST00000179691 110 ntBASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Gm26506-201ENSMUST00000179692 110 ntBASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Gm25086-201ENSMUST00000179931 110 ntBASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Gm23243-201ENSMUST00000180047 110 ntBASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Gm24659-201ENSMUST00000180212 110 ntBASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Gm24169-201ENSMUST00000180244 110 ntBASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Gm23689-201ENSMUST00000180354 110 ntBASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Gm27359-201ENSMUST00000184153 110 ntBASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Gm27785-201ENSMUST00000184268 110 ntBASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Gm27466-201ENSMUST00000184396 110 ntBASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Gm27703-201ENSMUST00000184836 110 ntBASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-2Q5R1I4 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-2Q5R1I4 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-2Q5R1I4 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-2Q5R1I4 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-2Q5R1I4 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Trav6-2Q5R1I4 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-2Q5R1I4 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-2Q5R1I4 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-2Q5R1I4 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav6-2Q5R1I4 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-2Q5R1I4 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Trav6-2Q5R1I4 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-2Q5R1I4 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-2Q5R1I4 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav6-2Q5R1I4 Gm25287-201ENSMUST00000103846 110 ntBASIC13.34□□□□□ -0.27
Trav6-2Q5R1I4 Gm22918-201ENSMUST00000103855 110 ntBASIC13.34□□□□□ -0.27
Trav6-2Q5R1I4 Gm6973-201ENSMUST00000117080 721 ntBASIC13.34□□□□□ -0.27
Trav6-2Q5R1I4 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav6-2Q5R1I4 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav6-2Q5R1I4 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-2Q5R1I4 Gm20949-201ENSMUST00000206478 952 ntBASIC13.34□□□□□ -0.27
Trav6-2Q5R1I4 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-2Q5R1I4 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-2Q5R1I4 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trav6-2Q5R1I4 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.34□□□□□ -0.27
Trav6-2Q5R1I4 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.34□□□□□ -0.27
Trav6-2Q5R1I4 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-2Q5R1I4 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-2Q5R1I4 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-2Q5R1I4 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-2Q5R1I4 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav6-2Q5R1I4 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav6-2Q5R1I4 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Trav6-2Q5R1I4 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-2Q5R1I4 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-2Q5R1I4 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav6-2Q5R1I4 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trav6-2Q5R1I4 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-2Q5R1I4 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav6-2Q5R1I4 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms