Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-4Q5R1I0 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-4Q5R1I0 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-4Q5R1I0 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-4Q5R1I0 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-4Q5R1I0 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-4Q5R1I0 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-4Q5R1I0 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-4Q5R1I0 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-4Q5R1I0 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-4Q5R1I0 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav6d-4Q5R1I0 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-4Q5R1I0 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-4Q5R1I0 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-4Q5R1I0 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-4Q5R1I0 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
Trav6d-4Q5R1I0 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav6d-4Q5R1I0 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-4Q5R1I0 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-4Q5R1I0 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-4Q5R1I0 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-4Q5R1I0 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-4Q5R1I0 Sybu-209ENSMUST00000228639 4113 ntBASIC12.79□□□□□ -0.36
Trav6d-4Q5R1I0 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-4Q5R1I0 Gm4995-201ENSMUST00000117247 432 ntBASIC12.79□□□□□ -0.36
Trav6d-4Q5R1I0 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav6d-4Q5R1I0 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-4Q5R1I0 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-4Q5R1I0 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav6d-4Q5R1I0 Gm44492-201ENSMUST00000197012 141 ntBASIC12.79□□□□□ -0.36
Trav6d-4Q5R1I0 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.79□□□□□ -0.36
Trav6d-4Q5R1I0 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-4Q5R1I0 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-4Q5R1I0 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-4Q5R1I0 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Trav6d-4Q5R1I0 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-4Q5R1I0 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-4Q5R1I0 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-4Q5R1I0 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-4Q5R1I0 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-4Q5R1I0 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-4Q5R1I0 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-4Q5R1I0 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-4Q5R1I0 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-4Q5R1I0 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-4Q5R1I0 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav6d-4Q5R1I0 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.79□□□□□ -0.36
Trav6d-4Q5R1I0 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav6d-4Q5R1I0 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-4Q5R1I0 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-4Q5R1I0 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Trav6d-4Q5R1I0 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-4Q5R1I0 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav6d-4Q5R1I0 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-4Q5R1I0 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.78□□□□□ -0.36
Trav6d-4Q5R1I0 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-4Q5R1I0 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-4Q5R1I0 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-4Q5R1I0 Gm27397-201ENSMUST00000184997 107 ntBASIC12.78□□□□□ -0.36
Trav6d-4Q5R1I0 Gm17968-201ENSMUST00000194902 784 ntBASIC12.78□□□□□ -0.36
Trav6d-4Q5R1I0 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Trav6d-4Q5R1I0 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav6d-4Q5R1I0 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.78□□□□□ -0.36
Trav6d-4Q5R1I0 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Trav6d-4Q5R1I0 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-4Q5R1I0 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav6d-4Q5R1I0 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-4Q5R1I0 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-4Q5R1I0 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-4Q5R1I0 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-4Q5R1I0 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-4Q5R1I0 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-4Q5R1I0 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-4Q5R1I0 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-4Q5R1I0 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-4Q5R1I0 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-4Q5R1I0 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-4Q5R1I0 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Trav6d-4Q5R1I0 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-4Q5R1I0 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6d-4Q5R1I0 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.77□□□□□ -0.36
Trav6d-4Q5R1I0 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6d-4Q5R1I0 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6d-4Q5R1I0 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6d-4Q5R1I0 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6d-4Q5R1I0 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.77□□□□□ -0.36
Trav6d-4Q5R1I0 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6d-4Q5R1I0 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Trav6d-4Q5R1I0 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6d-4Q5R1I0 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6d-4Q5R1I0 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-4Q5R1I0 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav6d-4Q5R1I0 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav6d-4Q5R1I0 Gm12008-201ENSMUST00000117791 755 ntBASIC12.77□□□□□ -0.37
Trav6d-4Q5R1I0 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.77□□□□□ -0.37
Trav6d-4Q5R1I0 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.77□□□□□ -0.37
Trav6d-4Q5R1I0 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-4Q5R1I0 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-4Q5R1I0 Gm25911-201ENSMUST00000157621 56 ntBASIC12.77□□□□□ -0.37
Trav6d-4Q5R1I0 Gm24513-201ENSMUST00000174964 138 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms