Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn2bQ56A07 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn2bQ56A07 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Scn2bQ56A07 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn2bQ56A07 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn2bQ56A07 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn2bQ56A07 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Scn2bQ56A07 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.09■□□□□ 0.01
Scn2bQ56A07 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.09■□□□□ 0.01
Scn2bQ56A07 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Scn2bQ56A07 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Scn2bQ56A07 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn2bQ56A07 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn2bQ56A07 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn2bQ56A07 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn2bQ56A07 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Scn2bQ56A07 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.09■□□□□ 0.01
Scn2bQ56A07 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn2bQ56A07 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn2bQ56A07 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn2bQ56A07 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn2bQ56A07 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn2bQ56A07 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn2bQ56A07 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn2bQ56A07 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.08■□□□□ 0.01
Scn2bQ56A07 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.08■□□□□ 0.01
Scn2bQ56A07 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Scn2bQ56A07 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Scn2bQ56A07 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Scn2bQ56A07 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Scn2bQ56A07 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Scn2bQ56A07 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Scn2bQ56A07 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Scn2bQ56A07 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Scn2bQ56A07 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Scn2bQ56A07 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Scn2bQ56A07 Gm24589-201ENSMUST00000116692 94 ntBASIC15.08■□□□□ 0
Scn2bQ56A07 Gm14722-201ENSMUST00000118943 689 ntBASIC15.08■□□□□ 0
Scn2bQ56A07 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Scn2bQ56A07 Gm9172-201ENSMUST00000212092 954 ntBASIC15.08■□□□□ 0
Scn2bQ56A07 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.08■□□□□ 0
Scn2bQ56A07 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.08■□□□□ 0
Scn2bQ56A07 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Scn2bQ56A07 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.08■□□□□ 0
Scn2bQ56A07 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Scn2bQ56A07 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Scn2bQ56A07 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.08■□□□□ 0
Scn2bQ56A07 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Scn2bQ56A07 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Scn2bQ56A07 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Scn2bQ56A07 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Scn2bQ56A07 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Scn2bQ56A07 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.08■□□□□ 0
Scn2bQ56A07 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn2bQ56A07 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.07■□□□□ 0
Scn2bQ56A07 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.07■□□□□ 0
Scn2bQ56A07 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.07■□□□□ 0
Scn2bQ56A07 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn2bQ56A07 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Scn2bQ56A07 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn2bQ56A07 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.07■□□□□ 0
Scn2bQ56A07 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn2bQ56A07 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn2bQ56A07 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Scn2bQ56A07 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.07■□□□□ 0
Scn2bQ56A07 Gm43347-201ENSMUST00000200226 580 ntBASIC15.07■□□□□ 0
Scn2bQ56A07 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.07■□□□□ 0
Scn2bQ56A07 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.07■□□□□ 0
Scn2bQ56A07 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.07■□□□□ 0
Scn2bQ56A07 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn2bQ56A07 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.07■□□□□ 0
Scn2bQ56A07 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn2bQ56A07 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Scn2bQ56A07 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.07■□□□□ 0
Scn2bQ56A07 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.07■□□□□ 0
Scn2bQ56A07 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn2bQ56A07 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.07■□□□□ 0
Scn2bQ56A07 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scn2bQ56A07 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Scn2bQ56A07 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.06■□□□□ 0
Scn2bQ56A07 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scn2bQ56A07 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scn2bQ56A07 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.06■□□□□ 0
Scn2bQ56A07 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scn2bQ56A07 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.06■□□□□ 0
Scn2bQ56A07 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.06■□□□□ 0
Scn2bQ56A07 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.06■□□□□ 0
Scn2bQ56A07 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scn2bQ56A07 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.06■□□□□ 0
Scn2bQ56A07 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.06■□□□□ 0
Scn2bQ56A07 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Scn2bQ56A07 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Scn2bQ56A07 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Scn2bQ56A07 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Scn2bQ56A07 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scn2bQ56A07 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Scn2bQ56A07 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scn2bQ56A07 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scn2bQ56A07 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Scn2bQ56A07 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms