Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf38aQ4FK66 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Prpf38aQ4FK66 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.75■□□□□ 0.43
Prpf38aQ4FK66 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf38aQ4FK66 Rprl2-201ENSMUST00000157150 290 ntBASIC17.75■□□□□ 0.43
Prpf38aQ4FK66 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf38aQ4FK66 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.75■□□□□ 0.43
Prpf38aQ4FK66 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Prpf38aQ4FK66 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Prpf38aQ4FK66 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf38aQ4FK66 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf38aQ4FK66 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf38aQ4FK66 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.75■□□□□ 0.43
Prpf38aQ4FK66 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf38aQ4FK66 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf38aQ4FK66 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf38aQ4FK66 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf38aQ4FK66 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.75■□□□□ 0.43
Prpf38aQ4FK66 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.75■□□□□ 0.43
Prpf38aQ4FK66 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf38aQ4FK66 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf38aQ4FK66 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
Prpf38aQ4FK66 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.74■□□□□ 0.43
Prpf38aQ4FK66 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Prpf38aQ4FK66 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf38aQ4FK66 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.74■□□□□ 0.43
Prpf38aQ4FK66 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf38aQ4FK66 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Prpf38aQ4FK66 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf38aQ4FK66 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf38aQ4FK66 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf38aQ4FK66 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf38aQ4FK66 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.74■□□□□ 0.43
Prpf38aQ4FK66 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf38aQ4FK66 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.73■□□□□ 0.43
Prpf38aQ4FK66 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf38aQ4FK66 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.73■□□□□ 0.43
Prpf38aQ4FK66 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf38aQ4FK66 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf38aQ4FK66 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf38aQ4FK66 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf38aQ4FK66 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Prpf38aQ4FK66 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.73■□□□□ 0.43
Prpf38aQ4FK66 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf38aQ4FK66 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.73■□□□□ 0.43
Prpf38aQ4FK66 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf38aQ4FK66 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf38aQ4FK66 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf38aQ4FK66 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf38aQ4FK66 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Prpf38aQ4FK66 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.73■□□□□ 0.43
Prpf38aQ4FK66 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Prpf38aQ4FK66 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.73■□□□□ 0.43
Prpf38aQ4FK66 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Prpf38aQ4FK66 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf38aQ4FK66 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Prpf38aQ4FK66 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf38aQ4FK66 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Prpf38aQ4FK66 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf38aQ4FK66 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf38aQ4FK66 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Prpf38aQ4FK66 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf38aQ4FK66 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf38aQ4FK66 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.72■□□□□ 0.43
Prpf38aQ4FK66 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf38aQ4FK66 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf38aQ4FK66 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.72■□□□□ 0.43
Prpf38aQ4FK66 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf38aQ4FK66 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf38aQ4FK66 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.72■□□□□ 0.43
Prpf38aQ4FK66 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf38aQ4FK66 Gm18889-201ENSMUST00000174284 929 ntBASIC17.72■□□□□ 0.43
Prpf38aQ4FK66 Mir6990-201ENSMUST00000183724 91 ntBASIC17.72■□□□□ 0.43
Prpf38aQ4FK66 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.72■□□□□ 0.43
Prpf38aQ4FK66 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf38aQ4FK66 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Prpf38aQ4FK66 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf38aQ4FK66 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Prpf38aQ4FK66 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Prpf38aQ4FK66 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf38aQ4FK66 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf38aQ4FK66 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf38aQ4FK66 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf38aQ4FK66 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf38aQ4FK66 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.72■□□□□ 0.43
Prpf38aQ4FK66 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Prpf38aQ4FK66 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Prpf38aQ4FK66 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf38aQ4FK66 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf38aQ4FK66 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.71■□□□□ 0.43
Prpf38aQ4FK66 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Prpf38aQ4FK66 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.71■□□□□ 0.43
Prpf38aQ4FK66 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf38aQ4FK66 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf38aQ4FK66 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf38aQ4FK66 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf38aQ4FK66 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf38aQ4FK66 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf38aQ4FK66 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf38aQ4FK66 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms