Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem40Q4FJU9 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem40Q4FJU9 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem40Q4FJU9 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem40Q4FJU9 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem40Q4FJU9 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem40Q4FJU9 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem40Q4FJU9 Gm13615-201ENSMUST00000120242 1612 ntBASIC12.98□□□□□ -0.33
Tmem40Q4FJU9 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem40Q4FJU9 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem40Q4FJU9 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem40Q4FJU9 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.98□□□□□ -0.33
Tmem40Q4FJU9 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem40Q4FJU9 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem40Q4FJU9 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Tmem40Q4FJU9 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem40Q4FJU9 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem40Q4FJU9 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem40Q4FJU9 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem40Q4FJU9 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem40Q4FJU9 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Tmem40Q4FJU9 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem40Q4FJU9 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Tmem40Q4FJU9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem40Q4FJU9 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Tmem40Q4FJU9 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem40Q4FJU9 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem40Q4FJU9 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem40Q4FJU9 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem40Q4FJU9 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.97□□□□□ -0.33
Tmem40Q4FJU9 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.97□□□□□ -0.33
Tmem40Q4FJU9 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.97□□□□□ -0.33
Tmem40Q4FJU9 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem40Q4FJU9 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem40Q4FJU9 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem40Q4FJU9 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem40Q4FJU9 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.97□□□□□ -0.33
Tmem40Q4FJU9 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Tmem40Q4FJU9 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem40Q4FJU9 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem40Q4FJU9 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem40Q4FJU9 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem40Q4FJU9 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem40Q4FJU9 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem40Q4FJU9 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem40Q4FJU9 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem40Q4FJU9 Asic1-205ENSMUST00000228185 1818 ntBASIC12.97□□□□□ -0.33
Tmem40Q4FJU9 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem40Q4FJU9 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem40Q4FJU9 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem40Q4FJU9 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tmem40Q4FJU9 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.97□□□□□ -0.33
Tmem40Q4FJU9 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tmem40Q4FJU9 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tmem40Q4FJU9 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tmem40Q4FJU9 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tmem40Q4FJU9 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tmem40Q4FJU9 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tmem40Q4FJU9 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tmem40Q4FJU9 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tmem40Q4FJU9 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tmem40Q4FJU9 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tmem40Q4FJU9 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.96□□□□□ -0.33
Tmem40Q4FJU9 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Tmem40Q4FJU9 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC12.96□□□□□ -0.33
Tmem40Q4FJU9 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tmem40Q4FJU9 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tmem40Q4FJU9 Mir1895-201ENSMUST00000122615 79 ntBASIC12.96□□□□□ -0.33
Tmem40Q4FJU9 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Tmem40Q4FJU9 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.96□□□□□ -0.33
Tmem40Q4FJU9 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tmem40Q4FJU9 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tmem40Q4FJU9 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Tmem40Q4FJU9 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Tmem40Q4FJU9 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.96□□□□□ -0.33
Tmem40Q4FJU9 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.96□□□□□ -0.33
Tmem40Q4FJU9 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.96□□□□□ -0.33
Tmem40Q4FJU9 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.96□□□□□ -0.33
Tmem40Q4FJU9 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tmem40Q4FJU9 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.96□□□□□ -0.33
Tmem40Q4FJU9 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tmem40Q4FJU9 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tmem40Q4FJU9 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tmem40Q4FJU9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tmem40Q4FJU9 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Tmem40Q4FJU9 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tmem40Q4FJU9 App-207ENSMUST00000227737 2827 ntBASIC12.96□□□□□ -0.34
Tmem40Q4FJU9 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Tmem40Q4FJU9 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.96□□□□□ -0.34
Tmem40Q4FJU9 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tmem40Q4FJU9 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tmem40Q4FJU9 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tmem40Q4FJU9 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tmem40Q4FJU9 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tmem40Q4FJU9 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tmem40Q4FJU9 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tmem40Q4FJU9 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tmem40Q4FJU9 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Tmem40Q4FJU9 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.95□□□□□ -0.34
Tmem40Q4FJU9 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms