Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc27Q3V036 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc27Q3V036 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc27Q3V036 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc27Q3V036 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc27Q3V036 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc27Q3V036 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc27Q3V036 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc27Q3V036 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc27Q3V036 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc27Q3V036 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Ccdc27Q3V036 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Ccdc27Q3V036 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc27Q3V036 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc27Q3V036 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc27Q3V036 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc27Q3V036 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc27Q3V036 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc27Q3V036 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc27Q3V036 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC19.46■□□□□ 0.71
Ccdc27Q3V036 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC19.46■□□□□ 0.71
Ccdc27Q3V036 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc27Q3V036 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc27Q3V036 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc27Q3V036 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc27Q3V036 Rprl3-201ENSMUST00000157400 290 ntBASIC19.46■□□□□ 0.71
Ccdc27Q3V036 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc27Q3V036 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Ccdc27Q3V036 Mir3081-201ENSMUST00000175305 84 ntBASIC19.46■□□□□ 0.71
Ccdc27Q3V036 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc27Q3V036 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ccdc27Q3V036 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc27Q3V036 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC19.46■□□□□ 0.71
Ccdc27Q3V036 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc27Q3V036 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc27Q3V036 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc27Q3V036 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ccdc27Q3V036 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC19.46■□□□□ 0.71
Ccdc27Q3V036 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc27Q3V036 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc27Q3V036 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc27Q3V036 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc27Q3V036 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc27Q3V036 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc27Q3V036 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc27Q3V036 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc27Q3V036 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc27Q3V036 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Ccdc27Q3V036 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc27Q3V036 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc27Q3V036 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc27Q3V036 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Ccdc27Q3V036 Gm12134-201ENSMUST00000122109 520 ntBASIC19.45■□□□□ 0.7
Ccdc27Q3V036 Gm27704-201ENSMUST00000185094 107 ntBASIC19.45■□□□□ 0.7
Ccdc27Q3V036 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Ccdc27Q3V036 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc27Q3V036 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc27Q3V036 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc27Q3V036 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc27Q3V036 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc27Q3V036 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc27Q3V036 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Ccdc27Q3V036 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc27Q3V036 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc27Q3V036 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc27Q3V036 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc27Q3V036 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc27Q3V036 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc27Q3V036 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc27Q3V036 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc27Q3V036 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19.44■□□□□ 0.7
Ccdc27Q3V036 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.44■□□□□ 0.7
Ccdc27Q3V036 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.44■□□□□ 0.7
Ccdc27Q3V036 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc27Q3V036 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc27Q3V036 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc27Q3V036 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc27Q3V036 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc27Q3V036 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc27Q3V036 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc27Q3V036 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc27Q3V036 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc27Q3V036 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ccdc27Q3V036 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc27Q3V036 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc27Q3V036 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ccdc27Q3V036 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc27Q3V036 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc27Q3V036 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc27Q3V036 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc27Q3V036 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc27Q3V036 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc27Q3V036 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc27Q3V036 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc27Q3V036 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc27Q3V036 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc27Q3V036 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc27Q3V036 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc27Q3V036 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc27Q3V036 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms