Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cks1brtQ3UNC9 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cks1brtQ3UNC9 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cks1brtQ3UNC9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cks1brtQ3UNC9 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cks1brtQ3UNC9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cks1brtQ3UNC9 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC11.02□□□□□ -0.65
Cks1brtQ3UNC9 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cks1brtQ3UNC9 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
Cks1brtQ3UNC9 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cks1brtQ3UNC9 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cks1brtQ3UNC9 Gm37297-201ENSMUST00000192974 2384 ntBASIC11.02□□□□□ -0.65
Cks1brtQ3UNC9 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cks1brtQ3UNC9 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cks1brtQ3UNC9 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cks1brtQ3UNC9 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cks1brtQ3UNC9 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cks1brtQ3UNC9 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cks1brtQ3UNC9 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1brtQ3UNC9 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1brtQ3UNC9 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC11.01□□□□□ -0.65
Cks1brtQ3UNC9 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1brtQ3UNC9 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1brtQ3UNC9 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cks1brtQ3UNC9 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cks1brtQ3UNC9 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1brtQ3UNC9 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1brtQ3UNC9 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1brtQ3UNC9 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC11.01□□□□□ -0.65
Cks1brtQ3UNC9 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1brtQ3UNC9 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Cks1brtQ3UNC9 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cks1brtQ3UNC9 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1brtQ3UNC9 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1brtQ3UNC9 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1brtQ3UNC9 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1brtQ3UNC9 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1brtQ3UNC9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC11.01□□□□□ -0.65
Cks1brtQ3UNC9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1brtQ3UNC9 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC11.01□□□□□ -0.65
Cks1brtQ3UNC9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1brtQ3UNC9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1brtQ3UNC9 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1brtQ3UNC9 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cks1brtQ3UNC9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC11.01□□□□□ -0.65
Cks1brtQ3UNC9 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1brtQ3UNC9 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
Cks1brtQ3UNC9 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1brtQ3UNC9 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Cks1brtQ3UNC9 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1brtQ3UNC9 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1brtQ3UNC9 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1brtQ3UNC9 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cks1brtQ3UNC9 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cks1brtQ3UNC9 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cks1brtQ3UNC9 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Cks1brtQ3UNC9 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1brtQ3UNC9 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1brtQ3UNC9 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1brtQ3UNC9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1brtQ3UNC9 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1brtQ3UNC9 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Cks1brtQ3UNC9 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1brtQ3UNC9 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cks1brtQ3UNC9 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Cks1brtQ3UNC9 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1brtQ3UNC9 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1brtQ3UNC9 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1brtQ3UNC9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC11□□□□□ -0.65
Cks1brtQ3UNC9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC11□□□□□ -0.65
Cks1brtQ3UNC9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC11□□□□□ -0.65
Cks1brtQ3UNC9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC11□□□□□ -0.65
Cks1brtQ3UNC9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1brtQ3UNC9 Gm4968-201ENSMUST00000071458 858 ntBASIC11□□□□□ -0.65
Cks1brtQ3UNC9 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC11□□□□□ -0.65
Cks1brtQ3UNC9 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cks1brtQ3UNC9 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11□□□□□ -0.65
Cks1brtQ3UNC9 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1brtQ3UNC9 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1brtQ3UNC9 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11□□□□□ -0.65
Cks1brtQ3UNC9 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1brtQ3UNC9 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1brtQ3UNC9 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1brtQ3UNC9 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1brtQ3UNC9 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1brtQ3UNC9 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1brtQ3UNC9 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1brtQ3UNC9 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Cks1brtQ3UNC9 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cks1brtQ3UNC9 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms