Protein–RNA interactions for Protein: Q3UHX8

Nkx6-3, Homeobox protein Nkx-6.3, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3Q3UHX8 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.36□□□□□ -0.11
Nkx6-3Q3UHX8 Gm17271-201ENSMUST00000165535 355 ntBASIC14.36□□□□□ -0.11
Nkx6-3Q3UHX8 Gm2272-201ENSMUST00000194903 582 ntBASIC14.36□□□□□ -0.11
Nkx6-3Q3UHX8 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-3Q3UHX8 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-3Q3UHX8 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-3Q3UHX8 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-3Q3UHX8 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Nkx6-3Q3UHX8 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-3Q3UHX8 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.36□□□□□ -0.11
Nkx6-3Q3UHX8 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-3Q3UHX8 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-3Q3UHX8 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-3Q3UHX8 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Nkx6-3Q3UHX8 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-3Q3UHX8 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx6-3Q3UHX8 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.36□□□□□ -0.11
Nkx6-3Q3UHX8 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.36□□□□□ -0.11
Nkx6-3Q3UHX8 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Nkx6-3Q3UHX8 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Nkx6-3Q3UHX8 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.35□□□□□ -0.11
Nkx6-3Q3UHX8 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Nkx6-3Q3UHX8 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-3Q3UHX8 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-3Q3UHX8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-3Q3UHX8 Gm15427-201ENSMUST00000117288 531 ntBASIC14.35□□□□□ -0.11
Nkx6-3Q3UHX8 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.35□□□□□ -0.11
Nkx6-3Q3UHX8 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-3Q3UHX8 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-3Q3UHX8 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.35□□□□□ -0.11
Nkx6-3Q3UHX8 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.35□□□□□ -0.11
Nkx6-3Q3UHX8 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-3Q3UHX8 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-3Q3UHX8 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-3Q3UHX8 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-3Q3UHX8 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Nkx6-3Q3UHX8 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-3Q3UHX8 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Nkx6-3Q3UHX8 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.35□□□□□ -0.11
Nkx6-3Q3UHX8 BC037039-201ENSMUST00000192003 2205 ntBASIC14.35□□□□□ -0.11
Nkx6-3Q3UHX8 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-3Q3UHX8 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-3Q3UHX8 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-3Q3UHX8 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-3Q3UHX8 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-3Q3UHX8 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-3Q3UHX8 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx6-3Q3UHX8 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.34□□□□□ -0.11
Nkx6-3Q3UHX8 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-3Q3UHX8 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-3Q3UHX8 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-3Q3UHX8 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Nkx6-3Q3UHX8 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-3Q3UHX8 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Nkx6-3Q3UHX8 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-3Q3UHX8 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-3Q3UHX8 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-3Q3UHX8 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.34□□□□□ -0.11
Nkx6-3Q3UHX8 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-3Q3UHX8 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Nkx6-3Q3UHX8 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.34□□□□□ -0.11
Nkx6-3Q3UHX8 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.34□□□□□ -0.11
Nkx6-3Q3UHX8 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.34□□□□□ -0.11
Nkx6-3Q3UHX8 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.34□□□□□ -0.11
Nkx6-3Q3UHX8 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-3Q3UHX8 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.34□□□□□ -0.11
Nkx6-3Q3UHX8 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-3Q3UHX8 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.34□□□□□ -0.11
Nkx6-3Q3UHX8 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-3Q3UHX8 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx6-3Q3UHX8 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nkx6-3Q3UHX8 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nkx6-3Q3UHX8 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nkx6-3Q3UHX8 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nkx6-3Q3UHX8 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.33□□□□□ -0.11
Nkx6-3Q3UHX8 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.33□□□□□ -0.12
Nkx6-3Q3UHX8 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.33□□□□□ -0.12
Nkx6-3Q3UHX8 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx6-3Q3UHX8 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Nkx6-3Q3UHX8 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx6-3Q3UHX8 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.33□□□□□ -0.12
Nkx6-3Q3UHX8 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.33□□□□□ -0.12
Nkx6-3Q3UHX8 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx6-3Q3UHX8 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.33□□□□□ -0.12
Nkx6-3Q3UHX8 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx6-3Q3UHX8 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.33□□□□□ -0.12
Nkx6-3Q3UHX8 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx6-3Q3UHX8 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.33□□□□□ -0.12
Nkx6-3Q3UHX8 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx6-3Q3UHX8 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx6-3Q3UHX8 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx6-3Q3UHX8 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx6-3Q3UHX8 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx6-3Q3UHX8 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Nkx6-3Q3UHX8 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx6-3Q3UHX8 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx6-3Q3UHX8 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx6-3Q3UHX8 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Nkx6-3Q3UHX8 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx6-3Q3UHX8 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms