Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brf2Q3UAW9 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brf2Q3UAW9 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brf2Q3UAW9 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brf2Q3UAW9 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brf2Q3UAW9 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brf2Q3UAW9 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brf2Q3UAW9 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Brf2Q3UAW9 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Brf2Q3UAW9 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.38□□□□□ -0.11
Brf2Q3UAW9 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.38□□□□□ -0.11
Brf2Q3UAW9 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brf2Q3UAW9 Gm27646-201ENSMUST00000183989 110 ntBASIC14.38□□□□□ -0.11
Brf2Q3UAW9 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.38□□□□□ -0.11
Brf2Q3UAW9 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.38□□□□□ -0.11
Brf2Q3UAW9 Gm6296-201ENSMUST00000222599 943 ntBASIC14.38□□□□□ -0.11
Brf2Q3UAW9 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.38□□□□□ -0.11
Brf2Q3UAW9 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.38□□□□□ -0.11
Brf2Q3UAW9 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brf2Q3UAW9 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brf2Q3UAW9 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brf2Q3UAW9 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brf2Q3UAW9 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Brf2Q3UAW9 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brf2Q3UAW9 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brf2Q3UAW9 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brf2Q3UAW9 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brf2Q3UAW9 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brf2Q3UAW9 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Brf2Q3UAW9 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brf2Q3UAW9 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Brf2Q3UAW9 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Brf2Q3UAW9 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brf2Q3UAW9 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brf2Q3UAW9 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brf2Q3UAW9 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Brf2Q3UAW9 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.37□□□□□ -0.11
Brf2Q3UAW9 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Brf2Q3UAW9 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.37□□□□□ -0.11
Brf2Q3UAW9 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brf2Q3UAW9 Gm8318-201ENSMUST00000182954 872 ntBASIC14.37□□□□□ -0.11
Brf2Q3UAW9 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.37□□□□□ -0.11
Brf2Q3UAW9 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.37□□□□□ -0.11
Brf2Q3UAW9 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.37□□□□□ -0.11
Brf2Q3UAW9 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brf2Q3UAW9 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brf2Q3UAW9 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brf2Q3UAW9 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Brf2Q3UAW9 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.37□□□□□ -0.11
Brf2Q3UAW9 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Brf2Q3UAW9 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Brf2Q3UAW9 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brf2Q3UAW9 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Brf2Q3UAW9 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Brf2Q3UAW9 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Brf2Q3UAW9 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Brf2Q3UAW9 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.36□□□□□ -0.11
Brf2Q3UAW9 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Brf2Q3UAW9 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.36□□□□□ -0.11
Brf2Q3UAW9 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Brf2Q3UAW9 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.36□□□□□ -0.11
Brf2Q3UAW9 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Brf2Q3UAW9 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Brf2Q3UAW9 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Brf2Q3UAW9 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.36□□□□□ -0.11
Brf2Q3UAW9 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Brf2Q3UAW9 Gm11780-201ENSMUST00000136880 516 ntBASIC14.36□□□□□ -0.11
Brf2Q3UAW9 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.36□□□□□ -0.11
Brf2Q3UAW9 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Brf2Q3UAW9 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.36□□□□□ -0.11
Brf2Q3UAW9 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.36□□□□□ -0.11
Brf2Q3UAW9 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.36□□□□□ -0.11
Brf2Q3UAW9 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Brf2Q3UAW9 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Brf2Q3UAW9 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Brf2Q3UAW9 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Brf2Q3UAW9 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Brf2Q3UAW9 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Brf2Q3UAW9 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Brf2Q3UAW9 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Brf2Q3UAW9 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Brf2Q3UAW9 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Brf2Q3UAW9 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.36□□□□□ -0.11
Brf2Q3UAW9 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Brf2Q3UAW9 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.36□□□□□ -0.11
Brf2Q3UAW9 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Brf2Q3UAW9 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Brf2Q3UAW9 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Brf2Q3UAW9 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Brf2Q3UAW9 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Brf2Q3UAW9 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Brf2Q3UAW9 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Brf2Q3UAW9 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Brf2Q3UAW9 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.35□□□□□ -0.11
Brf2Q3UAW9 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.35□□□□□ -0.11
Brf2Q3UAW9 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Brf2Q3UAW9 Gm44357-201ENSMUST00000195897 142 ntBASIC14.35□□□□□ -0.11
Brf2Q3UAW9 Gm19658-201ENSMUST00000196231 138 ntBASIC14.35□□□□□ -0.11
Brf2Q3UAW9 Gm44367-201ENSMUST00000196836 138 ntBASIC14.35□□□□□ -0.11
Brf2Q3UAW9 Gm44350-201ENSMUST00000197197 138 ntBASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms