Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col5a2Q3U962 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col5a2Q3U962 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col5a2Q3U962 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC17.91■□□□□ 0.46
Col5a2Q3U962 AY702102-202ENSMUST00000194651 1173 ntBASIC17.91■□□□□ 0.46
Col5a2Q3U962 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col5a2Q3U962 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC17.91■□□□□ 0.46
Col5a2Q3U962 Gm18624-201ENSMUST00000220966 658 ntBASIC17.91■□□□□ 0.46
Col5a2Q3U962 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col5a2Q3U962 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col5a2Q3U962 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col5a2Q3U962 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Col5a2Q3U962 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col5a2Q3U962 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col5a2Q3U962 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col5a2Q3U962 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col5a2Q3U962 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.91■□□□□ 0.46
Col5a2Q3U962 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col5a2Q3U962 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col5a2Q3U962 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col5a2Q3U962 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col5a2Q3U962 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col5a2Q3U962 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Col5a2Q3U962 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col5a2Q3U962 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col5a2Q3U962 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.9■□□□□ 0.46
Col5a2Q3U962 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col5a2Q3U962 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col5a2Q3U962 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col5a2Q3U962 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col5a2Q3U962 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC17.9■□□□□ 0.46
Col5a2Q3U962 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC17.9■□□□□ 0.46
Col5a2Q3U962 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC17.9■□□□□ 0.46
Col5a2Q3U962 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC17.9■□□□□ 0.46
Col5a2Q3U962 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC17.9■□□□□ 0.46
Col5a2Q3U962 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col5a2Q3U962 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col5a2Q3U962 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col5a2Q3U962 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.9■□□□□ 0.46
Col5a2Q3U962 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.9■□□□□ 0.46
Col5a2Q3U962 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col5a2Q3U962 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col5a2Q3U962 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.9■□□□□ 0.46
Col5a2Q3U962 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col5a2Q3U962 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Col5a2Q3U962 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col5a2Q3U962 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col5a2Q3U962 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col5a2Q3U962 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col5a2Q3U962 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col5a2Q3U962 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col5a2Q3U962 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col5a2Q3U962 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col5a2Q3U962 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.89■□□□□ 0.45
Col5a2Q3U962 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col5a2Q3U962 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC17.89■□□□□ 0.45
Col5a2Q3U962 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.89■□□□□ 0.45
Col5a2Q3U962 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col5a2Q3U962 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col5a2Q3U962 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC17.88■□□□□ 0.45
Col5a2Q3U962 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC17.88■□□□□ 0.45
Col5a2Q3U962 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC17.88■□□□□ 0.45
Col5a2Q3U962 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC17.88■□□□□ 0.45
Col5a2Q3U962 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC17.88■□□□□ 0.45
Col5a2Q3U962 Gm37917-201ENSMUST00000194711 392 ntBASIC17.88■□□□□ 0.45
Col5a2Q3U962 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC17.88■□□□□ 0.45
Col5a2Q3U962 Gm46209-201ENSMUST00000217912 553 ntBASIC17.88■□□□□ 0.45
Col5a2Q3U962 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col5a2Q3U962 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col5a2Q3U962 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col5a2Q3U962 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col5a2Q3U962 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col5a2Q3U962 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col5a2Q3U962 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Col5a2Q3U962 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col5a2Q3U962 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.88■□□□□ 0.45
Col5a2Q3U962 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col5a2Q3U962 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Col5a2Q3U962 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col5a2Q3U962 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col5a2Q3U962 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.88■□□□□ 0.45
Col5a2Q3U962 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.88■□□□□ 0.45
Col5a2Q3U962 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col5a2Q3U962 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col5a2Q3U962 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.88■□□□□ 0.45
Col5a2Q3U962 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col5a2Q3U962 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Col5a2Q3U962 Gm9522-201ENSMUST00000182394 926 ntBASIC17.88■□□□□ 0.45
Col5a2Q3U962 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.88■□□□□ 0.45
Col5a2Q3U962 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC17.88■□□□□ 0.45
Col5a2Q3U962 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col5a2Q3U962 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Col5a2Q3U962 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col5a2Q3U962 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col5a2Q3U962 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col5a2Q3U962 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
Col5a2Q3U962 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col5a2Q3U962 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col5a2Q3U962 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col5a2Q3U962 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms