Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Gm8825-201ENSMUST00000182565 998 ntBASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Gm4518-201ENSMUST00000182638 718 ntBASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim43aQ3TL54 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim43aQ3TL54 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim43aQ3TL54 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trim43aQ3TL54 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim43aQ3TL54 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim43aQ3TL54 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim43aQ3TL54 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim43aQ3TL54 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trim43aQ3TL54 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim43aQ3TL54 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.18■□□□□ 0.18
Trim43aQ3TL54 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.18■□□□□ 0.18
Trim43aQ3TL54 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim43aQ3TL54 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim43aQ3TL54 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.18■□□□□ 0.18
Trim43aQ3TL54 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim43aQ3TL54 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim43aQ3TL54 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
Trim43aQ3TL54 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim43aQ3TL54 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim43aQ3TL54 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Trim43aQ3TL54 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trim43aQ3TL54 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim43aQ3TL54 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Trim43aQ3TL54 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim43aQ3TL54 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim43aQ3TL54 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim43aQ3TL54 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim43aQ3TL54 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim43aQ3TL54 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim43aQ3TL54 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim43aQ3TL54 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.17■□□□□ 0.18
Trim43aQ3TL54 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim43aQ3TL54 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.17■□□□□ 0.18
Trim43aQ3TL54 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim43aQ3TL54 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.17■□□□□ 0.18
Trim43aQ3TL54 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim43aQ3TL54 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Trim43aQ3TL54 Gm9103-201ENSMUST00000119371 405 ntBASIC16.17■□□□□ 0.18
Trim43aQ3TL54 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim43aQ3TL54 Ank2-226ENSMUST00000189368 339 ntBASIC16.17■□□□□ 0.18
Trim43aQ3TL54 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim43aQ3TL54 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim43aQ3TL54 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Trim43aQ3TL54 Gm10819-201ENSMUST00000099988 561 ntBASIC16.17■□□□□ 0.18
Trim43aQ3TL54 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim43aQ3TL54 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Trim43aQ3TL54 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim43aQ3TL54 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim43aQ3TL54 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim43aQ3TL54 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trim43aQ3TL54 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trim43aQ3TL54 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.16■□□□□ 0.18
Trim43aQ3TL54 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43aQ3TL54 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43aQ3TL54 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43aQ3TL54 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Trim43aQ3TL54 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43aQ3TL54 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43aQ3TL54 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43aQ3TL54 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43aQ3TL54 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43aQ3TL54 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43aQ3TL54 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.16■□□□□ 0.18
Trim43aQ3TL54 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.16■□□□□ 0.18
Trim43aQ3TL54 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.16■□□□□ 0.18
Trim43aQ3TL54 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43aQ3TL54 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43aQ3TL54 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43aQ3TL54 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.16■□□□□ 0.18
Trim43aQ3TL54 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43aQ3TL54 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43aQ3TL54 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Trim43aQ3TL54 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.16■□□□□ 0.18
Trim43aQ3TL54 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43aQ3TL54 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.16■□□□□ 0.18
Trim43aQ3TL54 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43aQ3TL54 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.16■□□□□ 0.18
Trim43aQ3TL54 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43aQ3TL54 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms