Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccbe1Q3MI99 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC13.82□□□□□ -0.2
Ccbe1Q3MI99 AC153881.1-201ENSMUST00000214448 284 ntBASIC13.82□□□□□ -0.2
Ccbe1Q3MI99 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccbe1Q3MI99 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccbe1Q3MI99 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccbe1Q3MI99 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccbe1Q3MI99 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccbe1Q3MI99 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.82□□□□□ -0.2
Ccbe1Q3MI99 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccbe1Q3MI99 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccbe1Q3MI99 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ccbe1Q3MI99 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccbe1Q3MI99 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccbe1Q3MI99 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccbe1Q3MI99 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccbe1Q3MI99 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccbe1Q3MI99 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccbe1Q3MI99 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccbe1Q3MI99 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccbe1Q3MI99 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccbe1Q3MI99 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccbe1Q3MI99 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccbe1Q3MI99 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccbe1Q3MI99 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccbe1Q3MI99 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccbe1Q3MI99 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccbe1Q3MI99 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ccbe1Q3MI99 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccbe1Q3MI99 Gm23547-201ENSMUST00000158210 271 ntBASIC13.81□□□□□ -0.2
Ccbe1Q3MI99 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.81□□□□□ -0.2
Ccbe1Q3MI99 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.81□□□□□ -0.2
Ccbe1Q3MI99 AC154649.1-201ENSMUST00000227392 384 ntBASIC13.81□□□□□ -0.2
Ccbe1Q3MI99 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccbe1Q3MI99 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ccbe1Q3MI99 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.81□□□□□ -0.2
Ccbe1Q3MI99 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccbe1Q3MI99 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccbe1Q3MI99 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ccbe1Q3MI99 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccbe1Q3MI99 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccbe1Q3MI99 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC13.81□□□□□ -0.2
Ccbe1Q3MI99 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccbe1Q3MI99 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccbe1Q3MI99 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccbe1Q3MI99 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccbe1Q3MI99 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Ccbe1Q3MI99 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccbe1Q3MI99 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.8□□□□□ -0.2
Ccbe1Q3MI99 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccbe1Q3MI99 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Ccbe1Q3MI99 Matn2-206ENSMUST00000228570 2798 ntBASIC13.8□□□□□ -0.2
Ccbe1Q3MI99 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.8□□□□□ -0.2
Ccbe1Q3MI99 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccbe1Q3MI99 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Ccbe1Q3MI99 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Ccbe1Q3MI99 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccbe1Q3MI99 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccbe1Q3MI99 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccbe1Q3MI99 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccbe1Q3MI99 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ccbe1Q3MI99 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccbe1Q3MI99 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccbe1Q3MI99 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccbe1Q3MI99 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccbe1Q3MI99 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.8□□□□□ -0.2
Ccbe1Q3MI99 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccbe1Q3MI99 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccbe1Q3MI99 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Ccbe1Q3MI99 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccbe1Q3MI99 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.8□□□□□ -0.2
Ccbe1Q3MI99 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC13.8□□□□□ -0.2
Ccbe1Q3MI99 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccbe1Q3MI99 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccbe1Q3MI99 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccbe1Q3MI99 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccbe1Q3MI99 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccbe1Q3MI99 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccbe1Q3MI99 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccbe1Q3MI99 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccbe1Q3MI99 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Ccbe1Q3MI99 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccbe1Q3MI99 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.79□□□□□ -0.2
Ccbe1Q3MI99 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccbe1Q3MI99 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Ccbe1Q3MI99 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccbe1Q3MI99 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccbe1Q3MI99 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccbe1Q3MI99 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccbe1Q3MI99 Gm37055-201ENSMUST00000191866 133 ntBASIC13.79□□□□□ -0.2
Ccbe1Q3MI99 Gm42545-201ENSMUST00000202755 922 ntBASIC13.79□□□□□ -0.2
Ccbe1Q3MI99 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC13.79□□□□□ -0.2
Ccbe1Q3MI99 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccbe1Q3MI99 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccbe1Q3MI99 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccbe1Q3MI99 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccbe1Q3MI99 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccbe1Q3MI99 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Ccbe1Q3MI99 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccbe1Q3MI99 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms