Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Q3KNL4 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Q3KNL4 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Q3KNL4 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.01□□□□□ -0.01
Q3KNL4 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Q3KNL4 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Q3KNL4 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Q3KNL4 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Q3KNL4 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Q3KNL4 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Q3KNL4 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Q3KNL4 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.01□□□□□ -0.01
Q3KNL4 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.01□□□□□ -0.01
Q3KNL4 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Q3KNL4 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Q3KNL4 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Q3KNL4 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Q3KNL4 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Q3KNL4 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Q3KNL4 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Q3KNL4 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Q3KNL4 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Q3KNL4 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
Q3KNL4 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Q3KNL4 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Q3KNL4 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Q3KNL4 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Q3KNL4 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15□□□□□ -0.01
Q3KNL4 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15□□□□□ -0.01
Q3KNL4 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15□□□□□ -0.01
Q3KNL4 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15□□□□□ -0.01
Q3KNL4 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15□□□□□ -0.01
Q3KNL4 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15□□□□□ -0.01
Q3KNL4 Gm27704-201ENSMUST00000185094 107 ntBASIC15□□□□□ -0.01
Q3KNL4 Gm19164-201ENSMUST00000210667 640 ntBASIC15□□□□□ -0.01
Q3KNL4 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Q3KNL4 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15□□□□□ -0.01
Q3KNL4 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Q3KNL4 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Q3KNL4 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Q3KNL4 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Q3KNL4 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Q3KNL4 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15□□□□□ -0.01
Q3KNL4 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Q3KNL4 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Q3KNL4 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Q3KNL4 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Q3KNL4 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Q3KNL4 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Q3KNL4 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.99□□□□□ -0.01
Q3KNL4 Gm7284-201ENSMUST00000131667 944 ntBASIC14.99□□□□□ -0.01
Q3KNL4 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Q3KNL4 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.99□□□□□ -0.01
Q3KNL4 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Q3KNL4 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Q3KNL4 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Q3KNL4 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Q3KNL4 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Q3KNL4 Gm27867-201ENSMUST00000184778 125 ntBASIC14.99□□□□□ -0.01
Q3KNL4 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.99□□□□□ -0.01
Q3KNL4 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Q3KNL4 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Q3KNL4 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Q3KNL4 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Q3KNL4 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Q3KNL4 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Q3KNL4 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Q3KNL4 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Q3KNL4 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Q3KNL4 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Q3KNL4 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Q3KNL4 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Q3KNL4 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Q3KNL4 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Q3KNL4 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Q3KNL4 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
Q3KNL4 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Q3KNL4 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.98□□□□□ -0.01
Q3KNL4 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Q3KNL4 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.98□□□□□ -0.01
Q3KNL4 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Q3KNL4 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Q3KNL4 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.98□□□□□ -0.01
Q3KNL4 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Q3KNL4 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Q3KNL4 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Q3KNL4 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Q3KNL4 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
Q3KNL4 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Q3KNL4 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Q3KNL4 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Q3KNL4 Grk6-207ENSMUST00000225925 2769 ntBASIC14.97□□□□□ -0.01
Q3KNL4 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Q3KNL4 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Q3KNL4 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Q3KNL4 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Q3KNL4 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Q3KNL4 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Q3KNL4 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Q3KNL4 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms