Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim63Q38HM4 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim63Q38HM4 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim63Q38HM4 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim63Q38HM4 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim63Q38HM4 Gm29241-201ENSMUST00000189260 1096 ntBASIC12.61□□□□□ -0.39
Trim63Q38HM4 Gm45102-201ENSMUST00000207427 857 ntBASIC12.61□□□□□ -0.39
Trim63Q38HM4 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim63Q38HM4 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim63Q38HM4 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim63Q38HM4 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim63Q38HM4 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim63Q38HM4 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim63Q38HM4 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Trim63Q38HM4 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim63Q38HM4 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim63Q38HM4 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Trim63Q38HM4 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.61□□□□□ -0.39
Trim63Q38HM4 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim63Q38HM4 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim63Q38HM4 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Trim63Q38HM4 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim63Q38HM4 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim63Q38HM4 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim63Q38HM4 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim63Q38HM4 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim63Q38HM4 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim63Q38HM4 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim63Q38HM4 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim63Q38HM4 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim63Q38HM4 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim63Q38HM4 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim63Q38HM4 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim63Q38HM4 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim63Q38HM4 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.6□□□□□ -0.39
Trim63Q38HM4 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trim63Q38HM4 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim63Q38HM4 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trim63Q38HM4 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim63Q38HM4 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim63Q38HM4 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim63Q38HM4 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC12.6□□□□□ -0.39
Trim63Q38HM4 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim63Q38HM4 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trim63Q38HM4 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim63Q38HM4 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim63Q38HM4 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim63Q38HM4 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim63Q38HM4 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim63Q38HM4 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim63Q38HM4 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trim63Q38HM4 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim63Q38HM4 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim63Q38HM4 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim63Q38HM4 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim63Q38HM4 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trim63Q38HM4 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim63Q38HM4 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim63Q38HM4 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim63Q38HM4 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim63Q38HM4 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim63Q38HM4 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim63Q38HM4 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim63Q38HM4 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim63Q38HM4 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim63Q38HM4 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim63Q38HM4 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim63Q38HM4 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim63Q38HM4 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim63Q38HM4 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim63Q38HM4 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim63Q38HM4 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim63Q38HM4 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trim63Q38HM4 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim63Q38HM4 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim63Q38HM4 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim63Q38HM4 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim63Q38HM4 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim63Q38HM4 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim63Q38HM4 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim63Q38HM4 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim63Q38HM4 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim63Q38HM4 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim63Q38HM4 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim63Q38HM4 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim63Q38HM4 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim63Q38HM4 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trim63Q38HM4 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.39
Trim63Q38HM4 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trim63Q38HM4 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trim63Q38HM4 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Trim63Q38HM4 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim63Q38HM4 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim63Q38HM4 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim63Q38HM4 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim63Q38HM4 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trim63Q38HM4 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim63Q38HM4 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim63Q38HM4 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim63Q38HM4 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms