Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Ptchd3Q0EEE2 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ptchd3Q0EEE2 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ptchd3Q0EEE2 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ptchd3Q0EEE2 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ptchd3Q0EEE2 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ptchd3Q0EEE2 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ptchd3Q0EEE2 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ptchd3Q0EEE2 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ptchd3Q0EEE2 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ptchd3Q0EEE2 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ptchd3Q0EEE2 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ptchd3Q0EEE2 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ptchd3Q0EEE2 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ptchd3Q0EEE2 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.76□□□□□ -0.05
Ptchd3Q0EEE2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ptchd3Q0EEE2 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ptchd3Q0EEE2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ptchd3Q0EEE2 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.76□□□□□ -0.05
Ptchd3Q0EEE2 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.76□□□□□ -0.05
Ptchd3Q0EEE2 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Ptchd3Q0EEE2 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ptchd3Q0EEE2 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ptchd3Q0EEE2 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ptchd3Q0EEE2 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ptchd3Q0EEE2 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ptchd3Q0EEE2 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ptchd3Q0EEE2 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ptchd3Q0EEE2 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Ptchd3Q0EEE2 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ptchd3Q0EEE2 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
Ptchd3Q0EEE2 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ptchd3Q0EEE2 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ptchd3Q0EEE2 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.76□□□□□ -0.05
Ptchd3Q0EEE2 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ptchd3Q0EEE2 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ptchd3Q0EEE2 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ptchd3Q0EEE2 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.75□□□□□ -0.05
Ptchd3Q0EEE2 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ptchd3Q0EEE2 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ptchd3Q0EEE2 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ptchd3Q0EEE2 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ptchd3Q0EEE2 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ptchd3Q0EEE2 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ptchd3Q0EEE2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ptchd3Q0EEE2 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ptchd3Q0EEE2 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ptchd3Q0EEE2 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ptchd3Q0EEE2 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.75□□□□□ -0.05
Ptchd3Q0EEE2 Gm15794-201ENSMUST00000120182 631 ntBASIC14.75□□□□□ -0.05
Ptchd3Q0EEE2 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.75□□□□□ -0.05
Ptchd3Q0EEE2 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Ptchd3Q0EEE2 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.75□□□□□ -0.05
Ptchd3Q0EEE2 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Ptchd3Q0EEE2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ptchd3Q0EEE2 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.75□□□□□ -0.05
Ptchd3Q0EEE2 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ptchd3Q0EEE2 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.75□□□□□ -0.05
Ptchd3Q0EEE2 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ptchd3Q0EEE2 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
Ptchd3Q0EEE2 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ptchd3Q0EEE2 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ptchd3Q0EEE2 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ptchd3Q0EEE2 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ptchd3Q0EEE2 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ptchd3Q0EEE2 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ptchd3Q0EEE2 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ptchd3Q0EEE2 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Ptchd3Q0EEE2 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ptchd3Q0EEE2 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ptchd3Q0EEE2 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Ptchd3Q0EEE2 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Ptchd3Q0EEE2 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ptchd3Q0EEE2 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ptchd3Q0EEE2 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ptchd3Q0EEE2 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ptchd3Q0EEE2 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Ptchd3Q0EEE2 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ptchd3Q0EEE2 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ptchd3Q0EEE2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ptchd3Q0EEE2 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.74□□□□□ -0.05
Ptchd3Q0EEE2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ptchd3Q0EEE2 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ptchd3Q0EEE2 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ptchd3Q0EEE2 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Ptchd3Q0EEE2 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Ptchd3Q0EEE2 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ptchd3Q0EEE2 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ptchd3Q0EEE2 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ptchd3Q0EEE2 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ptchd3Q0EEE2 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.74□□□□□ -0.05
Ptchd3Q0EEE2 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ptchd3Q0EEE2 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ptchd3Q0EEE2 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ptchd3Q0EEE2 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Ptchd3Q0EEE2 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Ptchd3Q0EEE2 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ptchd3Q0EEE2 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ptchd3Q0EEE2 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ptchd3Q0EEE2 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms