Protein–RNA interactions for Protein: Q08943

Ssrp1, FACT complex subunit SSRP1, mousemouse

Known RBP Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssrp1Q08943 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ssrp1Q08943 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ssrp1Q08943 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ssrp1Q08943 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ssrp1Q08943 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Ssrp1Q08943 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.97■□□□□ 0.31
Ssrp1Q08943 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ssrp1Q08943 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Ssrp1Q08943 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.97■□□□□ 0.31
Ssrp1Q08943 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Ssrp1Q08943 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
Ssrp1Q08943 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.97■□□□□ 0.31
Ssrp1Q08943 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.97■□□□□ 0.31
Ssrp1Q08943 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
Ssrp1Q08943 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.97■□□□□ 0.31
Ssrp1Q08943 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.97■□□□□ 0.31
Ssrp1Q08943 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.97■□□□□ 0.31
Ssrp1Q08943 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ssrp1Q08943 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ssrp1Q08943 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ssrp1Q08943 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Ssrp1Q08943 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.97■□□□□ 0.31
Ssrp1Q08943 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ssrp1Q08943 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ssrp1Q08943 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ssrp1Q08943 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Ssrp1Q08943 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ssrp1Q08943 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ssrp1Q08943 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ssrp1Q08943 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ssrp1Q08943 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ssrp1Q08943 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ssrp1Q08943 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ssrp1Q08943 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ssrp1Q08943 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ssrp1Q08943 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Ssrp1Q08943 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ssrp1Q08943 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ssrp1Q08943 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ssrp1Q08943 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Ssrp1Q08943 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ssrp1Q08943 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.96■□□□□ 0.31
Ssrp1Q08943 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ssrp1Q08943 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ssrp1Q08943 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ssrp1Q08943 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ssrp1Q08943 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ssrp1Q08943 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ssrp1Q08943 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ssrp1Q08943 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ssrp1Q08943 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Ssrp1Q08943 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ssrp1Q08943 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ssrp1Q08943 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
Ssrp1Q08943 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ssrp1Q08943 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ssrp1Q08943 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.95■□□□□ 0.3
Ssrp1Q08943 Gm13418-201ENSMUST00000119097 944 ntBASIC16.95■□□□□ 0.3
Ssrp1Q08943 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ssrp1Q08943 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.95■□□□□ 0.3
Ssrp1Q08943 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ssrp1Q08943 Gm8318-201ENSMUST00000182954 872 ntBASIC16.95■□□□□ 0.3
Ssrp1Q08943 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.95■□□□□ 0.3
Ssrp1Q08943 Gm27459-201ENSMUST00000184860 107 ntBASIC16.95■□□□□ 0.3
Ssrp1Q08943 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.95■□□□□ 0.3
Ssrp1Q08943 Gm44357-201ENSMUST00000195897 142 ntBASIC16.95■□□□□ 0.3
Ssrp1Q08943 Gm19658-201ENSMUST00000196231 138 ntBASIC16.95■□□□□ 0.3
Ssrp1Q08943 Gm44367-201ENSMUST00000196836 138 ntBASIC16.95■□□□□ 0.3
Ssrp1Q08943 Gm44350-201ENSMUST00000197197 138 ntBASIC16.95■□□□□ 0.3
Ssrp1Q08943 Gm44390-201ENSMUST00000197533 144 ntBASIC16.95■□□□□ 0.3
Ssrp1Q08943 Gm44313-201ENSMUST00000198018 138 ntBASIC16.95■□□□□ 0.3
Ssrp1Q08943 Gm44486-201ENSMUST00000198508 138 ntBASIC16.95■□□□□ 0.3
Ssrp1Q08943 Gm44314-201ENSMUST00000199263 138 ntBASIC16.95■□□□□ 0.3
Ssrp1Q08943 Gm44394-201ENSMUST00000199558 138 ntBASIC16.95■□□□□ 0.3
Ssrp1Q08943 Gm44484-201ENSMUST00000199873 138 ntBASIC16.95■□□□□ 0.3
Ssrp1Q08943 Gm44466-201ENSMUST00000200264 138 ntBASIC16.95■□□□□ 0.3
Ssrp1Q08943 Gm44359-201ENSMUST00000200671 138 ntBASIC16.95■□□□□ 0.3
Ssrp1Q08943 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ssrp1Q08943 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.95■□□□□ 0.3
Ssrp1Q08943 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ssrp1Q08943 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ssrp1Q08943 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ssrp1Q08943 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ssrp1Q08943 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ssrp1Q08943 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ssrp1Q08943 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ssrp1Q08943 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ssrp1Q08943 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.94■□□□□ 0.3
Ssrp1Q08943 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.94■□□□□ 0.3
Ssrp1Q08943 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
Ssrp1Q08943 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ssrp1Q08943 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ssrp1Q08943 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ssrp1Q08943 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.94■□□□□ 0.3
Ssrp1Q08943 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ssrp1Q08943 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ssrp1Q08943 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.94■□□□□ 0.3
Ssrp1Q08943 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.94■□□□□ 0.3
Ssrp1Q08943 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.94■□□□□ 0.3
Ssrp1Q08943 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms