Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thbs3Q05895 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Thbs3Q05895 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Thbs3Q05895 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thbs3Q05895 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thbs3Q05895 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thbs3Q05895 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thbs3Q05895 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thbs3Q05895 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thbs3Q05895 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Thbs3Q05895 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thbs3Q05895 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.39□□□□□ -0.27
Thbs3Q05895 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Thbs3Q05895 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thbs3Q05895 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs3Q05895 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs3Q05895 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs3Q05895 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs3Q05895 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Thbs3Q05895 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs3Q05895 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs3Q05895 Sybu-209ENSMUST00000228639 4113 ntBASIC13.38□□□□□ -0.27
Thbs3Q05895 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.38□□□□□ -0.27
Thbs3Q05895 Gm13036-201ENSMUST00000117799 748 ntBASIC13.38□□□□□ -0.27
Thbs3Q05895 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs3Q05895 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.38□□□□□ -0.27
Thbs3Q05895 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.38□□□□□ -0.27
Thbs3Q05895 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs3Q05895 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.38□□□□□ -0.27
Thbs3Q05895 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs3Q05895 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs3Q05895 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs3Q05895 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs3Q05895 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs3Q05895 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs3Q05895 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs3Q05895 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs3Q05895 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs3Q05895 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.38□□□□□ -0.27
Thbs3Q05895 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs3Q05895 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Thbs3Q05895 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs3Q05895 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Thbs3Q05895 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Thbs3Q05895 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs3Q05895 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Thbs3Q05895 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs3Q05895 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs3Q05895 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Thbs3Q05895 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Thbs3Q05895 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs3Q05895 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs3Q05895 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs3Q05895 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs3Q05895 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs3Q05895 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs3Q05895 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs3Q05895 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.37□□□□□ -0.27
Thbs3Q05895 Gm2651-201ENSMUST00000203560 838 ntBASIC13.37□□□□□ -0.27
Thbs3Q05895 Gm45167-201ENSMUST00000208007 322 ntBASIC13.37□□□□□ -0.27
Thbs3Q05895 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.37□□□□□ -0.27
Thbs3Q05895 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.37□□□□□ -0.27
Thbs3Q05895 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs3Q05895 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs3Q05895 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs3Q05895 Gm7461-201ENSMUST00000058918 827 ntBASIC13.37□□□□□ -0.27
Thbs3Q05895 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs3Q05895 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs3Q05895 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs3Q05895 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Thbs3Q05895 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs3Q05895 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs3Q05895 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Thbs3Q05895 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs3Q05895 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs3Q05895 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Thbs3Q05895 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Thbs3Q05895 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thbs3Q05895 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thbs3Q05895 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thbs3Q05895 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thbs3Q05895 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.36□□□□□ -0.27
Thbs3Q05895 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thbs3Q05895 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.36□□□□□ -0.27
Thbs3Q05895 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.36□□□□□ -0.27
Thbs3Q05895 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thbs3Q05895 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.36□□□□□ -0.27
Thbs3Q05895 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.36□□□□□ -0.27
Thbs3Q05895 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thbs3Q05895 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thbs3Q05895 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thbs3Q05895 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.36□□□□□ -0.27
Thbs3Q05895 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Thbs3Q05895 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thbs3Q05895 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Thbs3Q05895 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.36□□□□□ -0.27
Thbs3Q05895 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Thbs3Q05895 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.36□□□□□ -0.27
Thbs3Q05895 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Thbs3Q05895 Gm18733-201ENSMUST00000173950 856 ntBASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms