Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nkx2-3P97334 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC19.08■□□□□ 0.64
Nkx2-3P97334 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Nkx2-3P97334 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC19.08■□□□□ 0.64
Nkx2-3P97334 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nkx2-3P97334 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nkx2-3P97334 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC19.07■□□□□ 0.64
Nkx2-3P97334 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nkx2-3P97334 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nkx2-3P97334 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nkx2-3P97334 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nkx2-3P97334 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nkx2-3P97334 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC19.07■□□□□ 0.64
Nkx2-3P97334 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Nkx2-3P97334 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC19.07■□□□□ 0.64
Nkx2-3P97334 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nkx2-3P97334 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC19.07■□□□□ 0.64
Nkx2-3P97334 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Nkx2-3P97334 Gm13453-201ENSMUST00000118708 357 ntBASIC19.07■□□□□ 0.64
Nkx2-3P97334 Gm15487-201ENSMUST00000122373 465 ntBASIC19.07■□□□□ 0.64
Nkx2-3P97334 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC19.07■□□□□ 0.64
Nkx2-3P97334 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC19.07■□□□□ 0.64
Nkx2-3P97334 Gm18737-201ENSMUST00000173594 937 ntBASIC19.07■□□□□ 0.64
Nkx2-3P97334 H2-Pa-201ENSMUST00000182803 626 ntBASIC19.07■□□□□ 0.64
Nkx2-3P97334 Gm6473-201ENSMUST00000188572 1210 ntBASIC19.07■□□□□ 0.64
Nkx2-3P97334 Gm18049-201ENSMUST00000208909 581 ntBASIC19.07■□□□□ 0.64
Nkx2-3P97334 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC19.07■□□□□ 0.64
Nkx2-3P97334 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Nkx2-3P97334 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
Nkx2-3P97334 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nkx2-3P97334 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nkx2-3P97334 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nkx2-3P97334 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nkx2-3P97334 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nkx2-3P97334 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nkx2-3P97334 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nkx2-3P97334 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Nkx2-3P97334 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx2-3P97334 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Nkx2-3P97334 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Nkx2-3P97334 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx2-3P97334 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx2-3P97334 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx2-3P97334 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Nkx2-3P97334 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Nkx2-3P97334 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx2-3P97334 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx2-3P97334 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC19.06■□□□□ 0.64
Nkx2-3P97334 Gm13823-201ENSMUST00000119930 345 ntBASIC19.06■□□□□ 0.64
Nkx2-3P97334 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx2-3P97334 Gm27533-201ENSMUST00000183800 152 ntBASIC19.06■□□□□ 0.64
Nkx2-3P97334 Mir6977-201ENSMUST00000184960 64 ntBASIC19.06■□□□□ 0.64
Nkx2-3P97334 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx2-3P97334 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC19.06■□□□□ 0.64
Nkx2-3P97334 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC19.06■□□□□ 0.64
Nkx2-3P97334 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx2-3P97334 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx2-3P97334 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC19.05■□□□□ 0.64
Nkx2-3P97334 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx2-3P97334 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx2-3P97334 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx2-3P97334 Gm42466-201ENSMUST00000202099 1301 ntBASIC19.05■□□□□ 0.64
Nkx2-3P97334 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx2-3P97334 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx2-3P97334 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Nkx2-3P97334 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Nkx2-3P97334 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx2-3P97334 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Nkx2-3P97334 Gm7775-201ENSMUST00000218871 853 ntBASIC19.05■□□□□ 0.64
Nkx2-3P97334 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx2-3P97334 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx2-3P97334 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx2-3P97334 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx2-3P97334 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC19.05■□□□□ 0.64
Nkx2-3P97334 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-3P97334 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-3P97334 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-3P97334 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-3P97334 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-3P97334 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-3P97334 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC19.04■□□□□ 0.64
Nkx2-3P97334 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.04■□□□□ 0.64
Nkx2-3P97334 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-3P97334 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-3P97334 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC19.04■□□□□ 0.64
Nkx2-3P97334 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Nkx2-3P97334 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-3P97334 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-3P97334 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC19.04■□□□□ 0.64
Nkx2-3P97334 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Nkx2-3P97334 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-3P97334 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-3P97334 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Nkx2-3P97334 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Nkx2-3P97334 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-3P97334 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-3P97334 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-3P97334 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Nkx2-3P97334 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC19.03■□□□□ 0.64
Nkx2-3P97334 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms