Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim43cP86449 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim43cP86449 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim43cP86449 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim43cP86449 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim43cP86449 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.57■□□□□ 0.24
Trim43cP86449 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim43cP86449 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim43cP86449 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim43cP86449 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim43cP86449 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trim43cP86449 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim43cP86449 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim43cP86449 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim43cP86449 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim43cP86449 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim43cP86449 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim43cP86449 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim43cP86449 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim43cP86449 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trim43cP86449 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim43cP86449 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim43cP86449 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43cP86449 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43cP86449 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43cP86449 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43cP86449 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43cP86449 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43cP86449 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43cP86449 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43cP86449 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43cP86449 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43cP86449 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trim43cP86449 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43cP86449 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43cP86449 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43cP86449 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Trim43cP86449 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43cP86449 Gm27300-201ENSMUST00000184085 97 ntBASIC16.56■□□□□ 0.24
Trim43cP86449 Gm27335-201ENSMUST00000184758 97 ntBASIC16.56■□□□□ 0.24
Trim43cP86449 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.56■□□□□ 0.24
Trim43cP86449 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim43cP86449 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43cP86449 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43cP86449 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43cP86449 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim43cP86449 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43cP86449 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43cP86449 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43cP86449 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43cP86449 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43cP86449 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43cP86449 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43cP86449 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43cP86449 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trim43cP86449 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim43cP86449 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim43cP86449 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim43cP86449 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim43cP86449 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim43cP86449 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim43cP86449 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Trim43cP86449 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim43cP86449 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim43cP86449 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim43cP86449 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Trim43cP86449 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim43cP86449 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.55■□□□□ 0.24
Trim43cP86449 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.55■□□□□ 0.24
Trim43cP86449 Gm2651-201ENSMUST00000203560 838 ntBASIC16.55■□□□□ 0.24
Trim43cP86449 Gm18195-201ENSMUST00000207604 706 ntBASIC16.55■□□□□ 0.24
Trim43cP86449 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim43cP86449 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim43cP86449 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim43cP86449 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim43cP86449 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim43cP86449 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim43cP86449 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim43cP86449 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trim43cP86449 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim43cP86449 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim43cP86449 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim43cP86449 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim43cP86449 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim43cP86449 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim43cP86449 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.54■□□□□ 0.24
Trim43cP86449 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Trim43cP86449 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.54■□□□□ 0.24
Trim43cP86449 Gm13597-201ENSMUST00000121239 375 ntBASIC16.54■□□□□ 0.24
Trim43cP86449 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trim43cP86449 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.54■□□□□ 0.24
Trim43cP86449 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.54■□□□□ 0.24
Trim43cP86449 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.54■□□□□ 0.24
Trim43cP86449 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim43cP86449 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.54■□□□□ 0.24
Trim43cP86449 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.54■□□□□ 0.24
Trim43cP86449 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Trim43cP86449 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim43cP86449 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trim43cP86449 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms