Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.6□□□□□ -0.23
SgcbP82349 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SgcbP82349 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.6□□□□□ -0.23
SgcbP82349 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
SgcbP82349 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SgcbP82349 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SgcbP82349 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
SgcbP82349 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.59□□□□□ -0.23
SgcbP82349 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
SgcbP82349 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SgcbP82349 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SgcbP82349 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SgcbP82349 Gm12260-201ENSMUST00000122447 411 ntBASIC13.59□□□□□ -0.23
SgcbP82349 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SgcbP82349 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.59□□□□□ -0.23
SgcbP82349 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.59□□□□□ -0.23
SgcbP82349 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.59□□□□□ -0.23
SgcbP82349 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SgcbP82349 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SgcbP82349 AW822252-206ENSMUST00000208904 237 ntBASIC13.59□□□□□ -0.23
SgcbP82349 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SgcbP82349 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SgcbP82349 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SgcbP82349 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SgcbP82349 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.59□□□□□ -0.23
SgcbP82349 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SgcbP82349 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SgcbP82349 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
SgcbP82349 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SgcbP82349 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.59□□□□□ -0.23
SgcbP82349 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.59□□□□□ -0.23
SgcbP82349 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SgcbP82349 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SgcbP82349 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SgcbP82349 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SgcbP82349 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SgcbP82349 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SgcbP82349 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SgcbP82349 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.58□□□□□ -0.23
SgcbP82349 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SgcbP82349 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SgcbP82349 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.58□□□□□ -0.24
SgcbP82349 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SgcbP82349 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
SgcbP82349 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SgcbP82349 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SgcbP82349 Gm4899-201ENSMUST00000178708 719 ntBASIC13.58□□□□□ -0.24
SgcbP82349 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.58□□□□□ -0.24
SgcbP82349 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.58□□□□□ -0.24
SgcbP82349 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SgcbP82349 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SgcbP82349 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SgcbP82349 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SgcbP82349 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.58□□□□□ -0.24
SgcbP82349 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
SgcbP82349 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SgcbP82349 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SgcbP82349 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SgcbP82349 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SgcbP82349 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SgcbP82349 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SgcbP82349 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SgcbP82349 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SgcbP82349 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SgcbP82349 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SgcbP82349 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SgcbP82349 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SgcbP82349 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SgcbP82349 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SgcbP82349 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SgcbP82349 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SgcbP82349 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SgcbP82349 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SgcbP82349 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.57□□□□□ -0.24
SgcbP82349 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.57□□□□□ -0.24
SgcbP82349 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SgcbP82349 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.57□□□□□ -0.24
SgcbP82349 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SgcbP82349 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SgcbP82349 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SgcbP82349 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.57□□□□□ -0.24
SgcbP82349 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SgcbP82349 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SgcbP82349 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.57□□□□□ -0.24
SgcbP82349 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SgcbP82349 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.57□□□□□ -0.24
SgcbP82349 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
SgcbP82349 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SgcbP82349 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SgcbP82349 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
SgcbP82349 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
SgcbP82349 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
SgcbP82349 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SgcbP82349 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.56□□□□□ -0.24
SgcbP82349 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.56□□□□□ -0.24
SgcbP82349 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.56□□□□□ -0.24
SgcbP82349 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.56□□□□□ -0.24
SgcbP82349 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SgcbP82349 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SgcbP82349 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms