Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.03■□□□□ -0
Traf6P70196 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Traf6P70196 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Traf6P70196 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.03■□□□□ -0
Traf6P70196 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Traf6P70196 Gm18669-201ENSMUST00000216049 778 ntBASIC15.03■□□□□ -0
Traf6P70196 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.03■□□□□ -0
Traf6P70196 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Traf6P70196 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.03■□□□□ -0
Traf6P70196 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.03■□□□□ -0
Traf6P70196 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Traf6P70196 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.03■□□□□ -0
Traf6P70196 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.03■□□□□ -0
Traf6P70196 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Traf6P70196 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.03■□□□□ -0
Traf6P70196 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Traf6P70196 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Traf6P70196 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Traf6P70196 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Traf6P70196 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Traf6P70196 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Traf6P70196 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Traf6P70196 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.02■□□□□ -0
Traf6P70196 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Traf6P70196 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Traf6P70196 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.02■□□□□ -0
Traf6P70196 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.02■□□□□ -0
Traf6P70196 Gm4459-201ENSMUST00000118750 468 ntBASIC15.02■□□□□ -0
Traf6P70196 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.02■□□□□ -0
Traf6P70196 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.02■□□□□ -0
Traf6P70196 Gm27357-201ENSMUST00000183754 135 ntBASIC15.02■□□□□ -0
Traf6P70196 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.02■□□□□ -0
Traf6P70196 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.02■□□□□ -0
Traf6P70196 Gm18622-201ENSMUST00000219361 595 ntBASIC15.02■□□□□ -0
Traf6P70196 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.02■□□□□ -0
Traf6P70196 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Traf6P70196 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Traf6P70196 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Traf6P70196 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Traf6P70196 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.02□□□□□ -0.01
Traf6P70196 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Traf6P70196 Efs-202ENSMUST00000227037 2540 ntBASIC15.02□□□□□ -0.01
Traf6P70196 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Traf6P70196 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Traf6P70196 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Traf6P70196 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.02□□□□□ -0.01
Traf6P70196 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Traf6P70196 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Traf6P70196 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Traf6P70196 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Traf6P70196 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Traf6P70196 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Traf6P70196 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Traf6P70196 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Traf6P70196 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Traf6P70196 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Traf6P70196 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Traf6P70196 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Traf6P70196 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Traf6P70196 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Traf6P70196 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.01□□□□□ -0.01
Traf6P70196 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.01□□□□□ -0.01
Traf6P70196 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.01□□□□□ -0.01
Traf6P70196 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.01□□□□□ -0.01
Traf6P70196 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Traf6P70196 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Traf6P70196 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Traf6P70196 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Traf6P70196 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Traf6P70196 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Traf6P70196 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Traf6P70196 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Traf6P70196 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Traf6P70196 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Traf6P70196 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Traf6P70196 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Traf6P70196 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Traf6P70196 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15□□□□□ -0.01
Traf6P70196 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15□□□□□ -0.01
Traf6P70196 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15□□□□□ -0.01
Traf6P70196 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Traf6P70196 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Traf6P70196 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Traf6P70196 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Traf6P70196 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Traf6P70196 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Traf6P70196 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15□□□□□ -0.01
Traf6P70196 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Traf6P70196 AC159093.1-201ENSMUST00000227779 380 ntBASIC15□□□□□ -0.01
Traf6P70196 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Traf6P70196 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Traf6P70196 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Traf6P70196 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Traf6P70196 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Traf6P70196 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15□□□□□ -0.01
Traf6P70196 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Traf6P70196 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Traf6P70196 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Traf6P70196 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Traf6P70196 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms