Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ThraP63058 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ThraP63058 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
ThraP63058 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
ThraP63058 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ThraP63058 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ThraP63058 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ThraP63058 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ThraP63058 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ThraP63058 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ThraP63058 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ThraP63058 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.44■□□□□ 0.06
ThraP63058 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.44■□□□□ 0.06
ThraP63058 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ThraP63058 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ThraP63058 Gm11594-201ENSMUST00000122313 162 ntBASIC15.44■□□□□ 0.06
ThraP63058 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
ThraP63058 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ThraP63058 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.44■□□□□ 0.06
ThraP63058 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ThraP63058 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.44■□□□□ 0.06
ThraP63058 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ThraP63058 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ThraP63058 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ThraP63058 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ThraP63058 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
ThraP63058 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ThraP63058 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
ThraP63058 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
ThraP63058 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ThraP63058 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ThraP63058 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ThraP63058 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.44■□□□□ 0.06
ThraP63058 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ThraP63058 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ThraP63058 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ThraP63058 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
ThraP63058 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.43■□□□□ 0.06
ThraP63058 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
ThraP63058 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.43■□□□□ 0.06
ThraP63058 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.43■□□□□ 0.06
ThraP63058 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ThraP63058 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ThraP63058 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ThraP63058 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ThraP63058 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.43■□□□□ 0.06
ThraP63058 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ThraP63058 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.43■□□□□ 0.06
ThraP63058 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ThraP63058 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
ThraP63058 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ThraP63058 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ThraP63058 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ThraP63058 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.43■□□□□ 0.06
ThraP63058 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
ThraP63058 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ThraP63058 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ThraP63058 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.43■□□□□ 0.06
ThraP63058 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.43■□□□□ 0.06
ThraP63058 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.43■□□□□ 0.06
ThraP63058 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ThraP63058 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
ThraP63058 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ThraP63058 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ThraP63058 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
ThraP63058 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ThraP63058 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ThraP63058 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
ThraP63058 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ThraP63058 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ThraP63058 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ThraP63058 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ThraP63058 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ThraP63058 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
ThraP63058 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
ThraP63058 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.42■□□□□ 0.06
ThraP63058 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.42■□□□□ 0.06
ThraP63058 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
ThraP63058 Gm5264-201ENSMUST00000190584 848 ntBASIC15.42■□□□□ 0.06
ThraP63058 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ThraP63058 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ThraP63058 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ThraP63058 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ThraP63058 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.42■□□□□ 0.06
ThraP63058 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
ThraP63058 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
ThraP63058 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.42■□□□□ 0.06
ThraP63058 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ThraP63058 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ThraP63058 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.42■□□□□ 0.06
ThraP63058 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ThraP63058 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ThraP63058 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ThraP63058 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ThraP63058 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ThraP63058 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
ThraP63058 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ThraP63058 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.41■□□□□ 0.06
ThraP63058 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
ThraP63058 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms