Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gabra1P62812 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Gabra1P62812 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Gabra1P62812 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gabra1P62812 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gabra1P62812 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gabra1P62812 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gabra1P62812 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gabra1P62812 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.86□□□□□ -0.35
Gabra1P62812 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gabra1P62812 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gabra1P62812 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gabra1P62812 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gabra1P62812 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gabra1P62812 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Gabra1P62812 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gabra1P62812 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gabra1P62812 Gm8520-201ENSMUST00000186517 868 ntBASIC12.86□□□□□ -0.35
Gabra1P62812 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.86□□□□□ -0.35
Gabra1P62812 AC153881.1-201ENSMUST00000214448 284 ntBASIC12.86□□□□□ -0.35
Gabra1P62812 AC154649.1-201ENSMUST00000227392 384 ntBASIC12.86□□□□□ -0.35
Gabra1P62812 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Gabra1P62812 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gabra1P62812 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Gabra1P62812 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gabra1P62812 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gabra1P62812 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gabra1P62812 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.86□□□□□ -0.35
Gabra1P62812 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gabra1P62812 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gabra1P62812 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gabra1P62812 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gabra1P62812 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.86□□□□□ -0.35
Gabra1P62812 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gabra1P62812 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Gabra1P62812 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gabra1P62812 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gabra1P62812 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gabra1P62812 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Gabra1P62812 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.85□□□□□ -0.35
Gabra1P62812 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gabra1P62812 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gabra1P62812 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Gabra1P62812 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gabra1P62812 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gabra1P62812 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gabra1P62812 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gabra1P62812 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gabra1P62812 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Gabra1P62812 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gabra1P62812 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Gabra1P62812 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Gabra1P62812 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Gabra1P62812 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Gabra1P62812 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.85□□□□□ -0.35
Gabra1P62812 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC12.85□□□□□ -0.35
Gabra1P62812 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gabra1P62812 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gabra1P62812 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gabra1P62812 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gabra1P62812 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gabra1P62812 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gabra1P62812 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.85□□□□□ -0.35
Gabra1P62812 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.85□□□□□ -0.35
Gabra1P62812 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gabra1P62812 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gabra1P62812 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.85□□□□□ -0.35
Gabra1P62812 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gabra1P62812 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gabra1P62812 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.85□□□□□ -0.35
Gabra1P62812 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gabra1P62812 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gabra1P62812 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Gabra1P62812 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gabra1P62812 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gabra1P62812 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Gabra1P62812 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Gabra1P62812 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.84□□□□□ -0.35
Gabra1P62812 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gabra1P62812 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gabra1P62812 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gabra1P62812 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC12.84□□□□□ -0.35
Gabra1P62812 Gm13474-201ENSMUST00000122466 815 ntBASIC12.84□□□□□ -0.35
Gabra1P62812 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gabra1P62812 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gabra1P62812 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Gabra1P62812 Gm21814-202ENSMUST00000203277 873 ntBASIC12.84□□□□□ -0.35
Gabra1P62812 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gabra1P62812 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Gabra1P62812 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gabra1P62812 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gabra1P62812 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Gabra1P62812 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gabra1P62812 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gabra1P62812 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gabra1P62812 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Gabra1P62812 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gabra1P62812 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gabra1P62812 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Gabra1P62812 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms