Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm3P62311 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Lsm3P62311 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Lsm3P62311 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lsm3P62311 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.96□□□□□ -0.18
Lsm3P62311 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lsm3P62311 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Lsm3P62311 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lsm3P62311 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lsm3P62311 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Lsm3P62311 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm3P62311 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm3P62311 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Lsm3P62311 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm3P62311 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Lsm3P62311 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm3P62311 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm3P62311 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm3P62311 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Lsm3P62311 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.95□□□□□ -0.18
Lsm3P62311 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm3P62311 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm3P62311 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm3P62311 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.95□□□□□ -0.18
Lsm3P62311 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.95□□□□□ -0.18
Lsm3P62311 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm3P62311 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm3P62311 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm3P62311 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Lsm3P62311 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Lsm3P62311 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Lsm3P62311 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm3P62311 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm3P62311 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.95□□□□□ -0.18
Lsm3P62311 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
Lsm3P62311 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
Lsm3P62311 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm3P62311 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm3P62311 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm3P62311 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm3P62311 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm3P62311 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm3P62311 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm3P62311 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm3P62311 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm3P62311 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Lsm3P62311 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Lsm3P62311 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm3P62311 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm3P62311 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm3P62311 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm3P62311 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Lsm3P62311 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm3P62311 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm3P62311 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm3P62311 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm3P62311 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm3P62311 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm3P62311 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm3P62311 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm3P62311 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC13.94□□□□□ -0.18
Lsm3P62311 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.94□□□□□ -0.18
Lsm3P62311 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm3P62311 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm3P62311 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm3P62311 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm3P62311 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm3P62311 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm3P62311 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm3P62311 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Lsm3P62311 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm3P62311 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm3P62311 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Lsm3P62311 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm3P62311 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm3P62311 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm3P62311 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Lsm3P62311 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm3P62311 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm3P62311 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.93□□□□□ -0.18
Lsm3P62311 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm3P62311 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Lsm3P62311 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm3P62311 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.93□□□□□ -0.18
Lsm3P62311 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm3P62311 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm3P62311 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm3P62311 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm3P62311 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm3P62311 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.93□□□□□ -0.18
Lsm3P62311 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm3P62311 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm3P62311 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm3P62311 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Lsm3P62311 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm3P62311 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Lsm3P62311 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm3P62311 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm3P62311 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm3P62311 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms