Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1bP61025 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1bP61025 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1bP61025 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1bP61025 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
Cks1bP61025 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1bP61025 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC10.9□□□□□ -0.66
Cks1bP61025 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1bP61025 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1bP61025 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1bP61025 Matn2-206ENSMUST00000228570 2798 ntBASIC10.9□□□□□ -0.66
Cks1bP61025 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1bP61025 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1bP61025 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1bP61025 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1bP61025 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Cks1bP61025 Gm43364-201ENSMUST00000196046 3274 ntBASIC10.9□□□□□ -0.66
Cks1bP61025 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1bP61025 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1bP61025 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1bP61025 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC10.9□□□□□ -0.66
Cks1bP61025 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Cks1bP61025 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1bP61025 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC10.9□□□□□ -0.66
Cks1bP61025 AC156016.1-201ENSMUST00000227190 1035 ntBASIC10.9□□□□□ -0.66
Cks1bP61025 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1bP61025 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1bP61025 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC10.9□□□□□ -0.66
Cks1bP61025 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1bP61025 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1bP61025 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Cks1bP61025 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cks1bP61025 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Cks1bP61025 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cks1bP61025 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC10.9□□□□□ -0.67
Cks1bP61025 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cks1bP61025 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cks1bP61025 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cks1bP61025 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cks1bP61025 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cks1bP61025 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cks1bP61025 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cks1bP61025 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cks1bP61025 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cks1bP61025 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cks1bP61025 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cks1bP61025 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cks1bP61025 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cks1bP61025 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cks1bP61025 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cks1bP61025 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cks1bP61025 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cks1bP61025 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC10.89□□□□□ -0.67
Cks1bP61025 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Cks1bP61025 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cks1bP61025 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cks1bP61025 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cks1bP61025 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cks1bP61025 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC10.89□□□□□ -0.67
Cks1bP61025 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.89□□□□□ -0.67
Cks1bP61025 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cks1bP61025 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cks1bP61025 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC10.89□□□□□ -0.67
Cks1bP61025 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cks1bP61025 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Cks1bP61025 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Cks1bP61025 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cks1bP61025 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cks1bP61025 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cks1bP61025 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cks1bP61025 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Cks1bP61025 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
Cks1bP61025 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cks1bP61025 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cks1bP61025 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cks1bP61025 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cks1bP61025 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cks1bP61025 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cks1bP61025 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cks1bP61025 Carlr-201ENSMUST00000181515 2574 ntBASIC10.88□□□□□ -0.67
Cks1bP61025 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cks1bP61025 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cks1bP61025 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cks1bP61025 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cks1bP61025 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cks1bP61025 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cks1bP61025 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Cks1bP61025 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cks1bP61025 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cks1bP61025 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Cks1bP61025 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Cks1bP61025 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Cks1bP61025 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cks1bP61025 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cks1bP61025 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cks1bP61025 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cks1bP61025 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cks1bP61025 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC10.88□□□□□ -0.67
Cks1bP61025 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cks1bP61025 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms