Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.55■□□□□ 0.4
Tpm2P58774 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm2P58774 Gm38058-201ENSMUST00000194323 4368 ntBASIC17.55■□□□□ 0.4
Tpm2P58774 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm2P58774 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm2P58774 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm2P58774 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm2P58774 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.55■□□□□ 0.4
Tpm2P58774 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm2P58774 Ntrk2-208ENSMUST00000225583 2719 ntBASIC17.55■□□□□ 0.4
Tpm2P58774 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tpm2P58774 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Tpm2P58774 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Tpm2P58774 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm2P58774 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm2P58774 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm2P58774 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm2P58774 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.54■□□□□ 0.4
Tpm2P58774 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm2P58774 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm2P58774 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm2P58774 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm2P58774 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Tpm2P58774 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm2P58774 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm2P58774 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm2P58774 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm2P58774 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm2P58774 Gm11355-201ENSMUST00000121120 306 ntBASIC17.54■□□□□ 0.4
Tpm2P58774 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.54■□□□□ 0.4
Tpm2P58774 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm2P58774 Gm43799-201ENSMUST00000201845 579 ntBASIC17.54■□□□□ 0.4
Tpm2P58774 Gm21559-201ENSMUST00000220638 855 ntBASIC17.54■□□□□ 0.4
Tpm2P58774 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm2P58774 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm2P58774 Gm8587-201ENSMUST00000076538 843 ntBASIC17.54■□□□□ 0.4
Tpm2P58774 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm2P58774 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm2P58774 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm2P58774 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm2P58774 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm2P58774 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.54■□□□□ 0.4
Tpm2P58774 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm2P58774 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Tpm2P58774 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm2P58774 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Tpm2P58774 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm2P58774 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Tpm2P58774 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm2P58774 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm2P58774 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tpm2P58774 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Tpm2P58774 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm2P58774 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Tpm2P58774 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm2P58774 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm2P58774 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm2P58774 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm2P58774 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm2P58774 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm2P58774 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.53■□□□□ 0.4
Tpm2P58774 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.53■□□□□ 0.4
Tpm2P58774 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Tpm2P58774 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm2P58774 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm2P58774 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm2P58774 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.53■□□□□ 0.4
Tpm2P58774 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm2P58774 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Tpm2P58774 Gm22697-201ENSMUST00000175194 63 ntBASIC17.53■□□□□ 0.4
Tpm2P58774 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm2P58774 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm2P58774 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm2P58774 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm2P58774 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm2P58774 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm2P58774 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm2P58774 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm2P58774 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Tpm2P58774 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.53■□□□□ 0.4
Tpm2P58774 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm2P58774 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm2P58774 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Tpm2P58774 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm2P58774 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tpm2P58774 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tpm2P58774 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.52■□□□□ 0.4
Tpm2P58774 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tpm2P58774 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tpm2P58774 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
Tpm2P58774 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tpm2P58774 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tpm2P58774 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Tpm2P58774 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tpm2P58774 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Tpm2P58774 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tpm2P58774 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Tpm2P58774 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.52■□□□□ 0.4
Tpm2P58774 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.52■□□□□ 0.4
Tpm2P58774 Gm44430-201ENSMUST00000203376 995 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms