Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Sssca1P56873 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sssca1P56873 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.34□□□□□ -0.43
Sssca1P56873 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.34□□□□□ -0.43
Sssca1P56873 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.34□□□□□ -0.43
Sssca1P56873 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.34□□□□□ -0.43
Sssca1P56873 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sssca1P56873 AC112142.1-201ENSMUST00000228796 918 ntBASIC12.34□□□□□ -0.43
Sssca1P56873 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sssca1P56873 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.34□□□□□ -0.43
Sssca1P56873 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sssca1P56873 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sssca1P56873 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sssca1P56873 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sssca1P56873 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Sssca1P56873 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sssca1P56873 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.34□□□□□ -0.43
Sssca1P56873 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sssca1P56873 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sssca1P56873 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sssca1P56873 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sssca1P56873 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sssca1P56873 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sssca1P56873 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Sssca1P56873 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Sssca1P56873 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sssca1P56873 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Sssca1P56873 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sssca1P56873 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sssca1P56873 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sssca1P56873 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sssca1P56873 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.33□□□□□ -0.44
Sssca1P56873 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sssca1P56873 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sssca1P56873 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sssca1P56873 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sssca1P56873 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sssca1P56873 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sssca1P56873 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sssca1P56873 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sssca1P56873 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sssca1P56873 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.33□□□□□ -0.44
Sssca1P56873 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sssca1P56873 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Sssca1P56873 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Sssca1P56873 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.33□□□□□ -0.44
Sssca1P56873 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sssca1P56873 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sssca1P56873 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sssca1P56873 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sssca1P56873 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sssca1P56873 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sssca1P56873 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sssca1P56873 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sssca1P56873 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Sssca1P56873 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Sssca1P56873 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Sssca1P56873 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sssca1P56873 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sssca1P56873 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.32□□□□□ -0.44
Sssca1P56873 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sssca1P56873 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sssca1P56873 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
Sssca1P56873 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Sssca1P56873 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.32□□□□□ -0.44
Sssca1P56873 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sssca1P56873 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sssca1P56873 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sssca1P56873 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sssca1P56873 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sssca1P56873 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sssca1P56873 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sssca1P56873 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sssca1P56873 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sssca1P56873 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sssca1P56873 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Sssca1P56873 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sssca1P56873 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.32□□□□□ -0.44
Sssca1P56873 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.32□□□□□ -0.44
Sssca1P56873 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.32□□□□□ -0.44
Sssca1P56873 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.32□□□□□ -0.44
Sssca1P56873 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.32□□□□□ -0.44
Sssca1P56873 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sssca1P56873 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.32□□□□□ -0.44
Sssca1P56873 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.32□□□□□ -0.44
Sssca1P56873 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.32□□□□□ -0.44
Sssca1P56873 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.32□□□□□ -0.44
Sssca1P56873 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.32□□□□□ -0.44
Sssca1P56873 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.32□□□□□ -0.44
Sssca1P56873 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.32□□□□□ -0.44
Sssca1P56873 Gm8825-201ENSMUST00000182565 998 ntBASIC12.32□□□□□ -0.44
Sssca1P56873 Gm4518-201ENSMUST00000182638 718 ntBASIC12.32□□□□□ -0.44
Sssca1P56873 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.32□□□□□ -0.44
Sssca1P56873 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.32□□□□□ -0.44
Sssca1P56873 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.32□□□□□ -0.44
Sssca1P56873 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sssca1P56873 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sssca1P56873 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.32□□□□□ -0.44
Sssca1P56873 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.32□□□□□ -0.44
Sssca1P56873 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms