Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Irf5P56477 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Irf5P56477 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC18.06■□□□□ 0.48
Irf5P56477 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Irf5P56477 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Irf5P56477 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Irf5P56477 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Irf5P56477 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Irf5P56477 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Irf5P56477 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Irf5P56477 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Irf5P56477 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Irf5P56477 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Irf5P56477 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Irf5P56477 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Irf5P56477 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Irf5P56477 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Irf5P56477 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Irf5P56477 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC18.05■□□□□ 0.48
Irf5P56477 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Irf5P56477 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Irf5P56477 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Irf5P56477 Mir6956-201ENSMUST00000183598 62 ntBASIC18.05■□□□□ 0.48
Irf5P56477 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Irf5P56477 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Irf5P56477 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Irf5P56477 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Irf5P56477 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Irf5P56477 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Irf5P56477 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Irf5P56477 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Irf5P56477 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Irf5P56477 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Irf5P56477 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Irf5P56477 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Irf5P56477 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Irf5P56477 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Irf5P56477 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.04■□□□□ 0.48
Irf5P56477 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Irf5P56477 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Irf5P56477 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Irf5P56477 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.04■□□□□ 0.48
Irf5P56477 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Irf5P56477 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Irf5P56477 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Irf5P56477 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC18.04■□□□□ 0.48
Irf5P56477 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Irf5P56477 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Irf5P56477 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Irf5P56477 Gm45167-201ENSMUST00000208007 322 ntBASIC18.04■□□□□ 0.48
Irf5P56477 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Irf5P56477 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Irf5P56477 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Irf5P56477 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Irf5P56477 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Irf5P56477 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Irf5P56477 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Irf5P56477 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.04■□□□□ 0.48
Irf5P56477 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Irf5P56477 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Irf5P56477 Gm37019-201ENSMUST00000192133 2134 ntBASIC18.04■□□□□ 0.48
Irf5P56477 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Irf5P56477 Gm29340-201ENSMUST00000188763 3854 ntBASIC18.03■□□□□ 0.48
Irf5P56477 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Irf5P56477 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Irf5P56477 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Irf5P56477 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.03■□□□□ 0.48
Irf5P56477 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Irf5P56477 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Irf5P56477 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Irf5P56477 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Irf5P56477 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Irf5P56477 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC18.03■□□□□ 0.48
Irf5P56477 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC18.03■□□□□ 0.48
Irf5P56477 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Irf5P56477 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC18.03■□□□□ 0.48
Irf5P56477 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Irf5P56477 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC18.03■□□□□ 0.48
Irf5P56477 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Irf5P56477 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC18.03■□□□□ 0.48
Irf5P56477 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Irf5P56477 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Irf5P56477 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Irf5P56477 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.03■□□□□ 0.48
Irf5P56477 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Irf5P56477 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Irf5P56477 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Irf5P56477 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
Irf5P56477 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Irf5P56477 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Irf5P56477 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Irf5P56477 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Irf5P56477 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Irf5P56477 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Irf5P56477 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.02■□□□□ 0.48
Irf5P56477 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC18.02■□□□□ 0.48
Irf5P56477 Gm4899-201ENSMUST00000178708 719 ntBASIC18.02■□□□□ 0.48
Irf5P56477 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC18.02■□□□□ 0.48
Irf5P56477 Gm9682-201ENSMUST00000197505 556 ntBASIC18.02■□□□□ 0.48
Irf5P56477 AC154572.2-201ENSMUST00000225105 997 ntBASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms