Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh11P55288 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh11P55288 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.92□□□□□ -0.18
Cdh11P55288 Gm44454-201ENSMUST00000198541 138 ntBASIC13.92□□□□□ -0.18
Cdh11P55288 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh11P55288 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.92□□□□□ -0.18
Cdh11P55288 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh11P55288 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh11P55288 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh11P55288 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh11P55288 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh11P55288 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh11P55288 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh11P55288 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh11P55288 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cdh11P55288 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Cdh11P55288 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Cdh11P55288 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh11P55288 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh11P55288 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh11P55288 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh11P55288 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.91□□□□□ -0.18
Cdh11P55288 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh11P55288 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cdh11P55288 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh11P55288 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cdh11P55288 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Cdh11P55288 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cdh11P55288 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Cdh11P55288 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh11P55288 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh11P55288 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh11P55288 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh11P55288 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh11P55288 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh11P55288 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.91□□□□□ -0.18
Cdh11P55288 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh11P55288 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.91□□□□□ -0.18
Cdh11P55288 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.91□□□□□ -0.18
Cdh11P55288 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh11P55288 Gm27867-201ENSMUST00000184778 125 ntBASIC13.91□□□□□ -0.18
Cdh11P55288 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.91□□□□□ -0.18
Cdh11P55288 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.91□□□□□ -0.18
Cdh11P55288 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh11P55288 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh11P55288 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cdh11P55288 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh11P55288 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh11P55288 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh11P55288 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Cdh11P55288 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh11P55288 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh11P55288 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh11P55288 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh11P55288 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh11P55288 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh11P55288 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh11P55288 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh11P55288 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cdh11P55288 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh11P55288 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Cdh11P55288 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.9□□□□□ -0.18
Cdh11P55288 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh11P55288 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh11P55288 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Cdh11P55288 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.9□□□□□ -0.18
Cdh11P55288 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh11P55288 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh11P55288 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.9□□□□□ -0.18
Cdh11P55288 Gm11452-201ENSMUST00000122376 690 ntBASIC13.9□□□□□ -0.18
Cdh11P55288 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh11P55288 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.9□□□□□ -0.18
Cdh11P55288 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh11P55288 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh11P55288 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh11P55288 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.9□□□□□ -0.18
Cdh11P55288 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh11P55288 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh11P55288 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh11P55288 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh11P55288 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh11P55288 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cdh11P55288 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.9□□□□□ -0.18
Cdh11P55288 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Cdh11P55288 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Cdh11P55288 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Cdh11P55288 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.19
Cdh11P55288 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh11P55288 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh11P55288 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh11P55288 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh11P55288 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh11P55288 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Cdh11P55288 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh11P55288 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh11P55288 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh11P55288 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Cdh11P55288 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.89□□□□□ -0.19
Cdh11P55288 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdh11P55288 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms