Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.13■□□□□ 0.01
Atxn1P54254 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atxn1P54254 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atxn1P54254 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.13■□□□□ 0.01
Atxn1P54254 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atxn1P54254 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atxn1P54254 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Atxn1P54254 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.13■□□□□ 0.01
Atxn1P54254 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Atxn1P54254 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.13■□□□□ 0.01
Atxn1P54254 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atxn1P54254 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atxn1P54254 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.12■□□□□ 0.01
Atxn1P54254 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atxn1P54254 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atxn1P54254 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atxn1P54254 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atxn1P54254 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atxn1P54254 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atxn1P54254 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atxn1P54254 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atxn1P54254 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.12■□□□□ 0.01
Atxn1P54254 Gm8344-201ENSMUST00000119813 856 ntBASIC15.12■□□□□ 0.01
Atxn1P54254 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Atxn1P54254 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.12■□□□□ 0.01
Atxn1P54254 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.12■□□□□ 0.01
Atxn1P54254 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Atxn1P54254 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Atxn1P54254 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Atxn1P54254 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC15.12■□□□□ 0.01
Atxn1P54254 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atxn1P54254 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.12■□□□□ 0.01
Atxn1P54254 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atxn1P54254 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atxn1P54254 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atxn1P54254 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atxn1P54254 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Atxn1P54254 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.12■□□□□ 0.01
Atxn1P54254 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Atxn1P54254 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atxn1P54254 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Atxn1P54254 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Atxn1P54254 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atxn1P54254 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atxn1P54254 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atxn1P54254 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Atxn1P54254 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atxn1P54254 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atxn1P54254 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.11■□□□□ 0.01
Atxn1P54254 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Atxn1P54254 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atxn1P54254 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atxn1P54254 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atxn1P54254 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atxn1P54254 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atxn1P54254 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.11■□□□□ 0.01
Atxn1P54254 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Atxn1P54254 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Atxn1P54254 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.11■□□□□ 0.01
Atxn1P54254 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Atxn1P54254 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.11■□□□□ 0.01
Atxn1P54254 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Atxn1P54254 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Atxn1P54254 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atxn1P54254 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atxn1P54254 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atxn1P54254 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atxn1P54254 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atxn1P54254 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Atxn1P54254 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atxn1P54254 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Atxn1P54254 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Atxn1P54254 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Atxn1P54254 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atxn1P54254 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atxn1P54254 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atxn1P54254 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Atxn1P54254 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atxn1P54254 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atxn1P54254 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Atxn1P54254 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atxn1P54254 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Atxn1P54254 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atxn1P54254 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atxn1P54254 Gm22065-201ENSMUST00000103753 110 ntBASIC15.1■□□□□ 0.01
Atxn1P54254 Gm22066-201ENSMUST00000103761 110 ntBASIC15.1■□□□□ 0.01
Atxn1P54254 Gm24932-201ENSMUST00000103763 110 ntBASIC15.1■□□□□ 0.01
Atxn1P54254 Gm24115-201ENSMUST00000103799 110 ntBASIC15.1■□□□□ 0.01
Atxn1P54254 Gm22190-201ENSMUST00000103827 110 ntBASIC15.1■□□□□ 0.01
Atxn1P54254 Gm22191-201ENSMUST00000103831 110 ntBASIC15.1■□□□□ 0.01
Atxn1P54254 Gm24721-201ENSMUST00000103849 110 ntBASIC15.1■□□□□ 0.01
Atxn1P54254 Gm28018-201ENSMUST00000103869 110 ntBASIC15.1■□□□□ 0.01
Atxn1P54254 Gm26399-201ENSMUST00000103937 110 ntBASIC15.1■□□□□ 0.01
Atxn1P54254 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Atxn1P54254 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Atxn1P54254 Gm15358-201ENSMUST00000119249 520 ntBASIC15.1■□□□□ 0.01
Atxn1P54254 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Atxn1P54254 Gm18489-201ENSMUST00000172565 551 ntBASIC15.1■□□□□ 0.01
Atxn1P54254 Gm24158-201ENSMUST00000175263 71 ntBASIC15.1■□□□□ 0.01
Atxn1P54254 Gm25349-201ENSMUST00000177728 110 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms