Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Fdft1P53798 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.26■□□□□ 0.03
Fdft1P53798 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.26■□□□□ 0.03
Fdft1P53798 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.26■□□□□ 0.03
Fdft1P53798 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fdft1P53798 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Fdft1P53798 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.26■□□□□ 0.03
Fdft1P53798 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Fdft1P53798 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.26■□□□□ 0.03
Fdft1P53798 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fdft1P53798 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.26■□□□□ 0.03
Fdft1P53798 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fdft1P53798 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Fdft1P53798 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Fdft1P53798 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fdft1P53798 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Fdft1P53798 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fdft1P53798 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fdft1P53798 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fdft1P53798 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fdft1P53798 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.26■□□□□ 0.03
Fdft1P53798 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Fdft1P53798 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Fdft1P53798 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fdft1P53798 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Fdft1P53798 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fdft1P53798 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Fdft1P53798 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fdft1P53798 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fdft1P53798 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.25■□□□□ 0.03
Fdft1P53798 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Fdft1P53798 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Fdft1P53798 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fdft1P53798 Gm19164-201ENSMUST00000210667 640 ntBASIC15.25■□□□□ 0.03
Fdft1P53798 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.25■□□□□ 0.03
Fdft1P53798 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fdft1P53798 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fdft1P53798 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fdft1P53798 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.25■□□□□ 0.03
Fdft1P53798 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fdft1P53798 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fdft1P53798 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fdft1P53798 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Fdft1P53798 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Fdft1P53798 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Fdft1P53798 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.25■□□□□ 0.03
Fdft1P53798 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fdft1P53798 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fdft1P53798 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Fdft1P53798 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fdft1P53798 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fdft1P53798 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.25■□□□□ 0.03
Fdft1P53798 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fdft1P53798 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fdft1P53798 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Fdft1P53798 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fdft1P53798 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.24■□□□□ 0.03
Fdft1P53798 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fdft1P53798 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fdft1P53798 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.24■□□□□ 0.03
Fdft1P53798 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fdft1P53798 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Fdft1P53798 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Fdft1P53798 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fdft1P53798 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.24■□□□□ 0.03
Fdft1P53798 Gm9103-201ENSMUST00000119371 405 ntBASIC15.24■□□□□ 0.03
Fdft1P53798 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.24■□□□□ 0.03
Fdft1P53798 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Fdft1P53798 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fdft1P53798 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fdft1P53798 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Fdft1P53798 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Fdft1P53798 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.24■□□□□ 0.03
Fdft1P53798 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fdft1P53798 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fdft1P53798 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Fdft1P53798 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fdft1P53798 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Fdft1P53798 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fdft1P53798 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Fdft1P53798 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fdft1P53798 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fdft1P53798 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fdft1P53798 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Fdft1P53798 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fdft1P53798 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.24■□□□□ 0.03
Fdft1P53798 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Fdft1P53798 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Fdft1P53798 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Fdft1P53798 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Fdft1P53798 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Fdft1P53798 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Fdft1P53798 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Fdft1P53798 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Fdft1P53798 Gm8097-201ENSMUST00000117903 829 ntBASIC15.23■□□□□ 0.03
Fdft1P53798 Gm8344-201ENSMUST00000119813 856 ntBASIC15.23■□□□□ 0.03
Fdft1P53798 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Fdft1P53798 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Fdft1P53798 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Fdft1P53798 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 144.4 ms