Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Sox3P53784 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox3P53784 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Sox3P53784 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox3P53784 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox3P53784 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Sox3P53784 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox3P53784 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox3P53784 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.61□□□□□ -0.07
Sox3P53784 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.6□□□□□ -0.07
Sox3P53784 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox3P53784 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox3P53784 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Sox3P53784 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox3P53784 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Sox3P53784 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sox3P53784 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sox3P53784 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox3P53784 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Sox3P53784 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox3P53784 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sox3P53784 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox3P53784 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.6□□□□□ -0.07
Sox3P53784 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox3P53784 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox3P53784 Mir7023-201ENSMUST00000185093 64 ntBASIC14.6□□□□□ -0.07
Sox3P53784 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.6□□□□□ -0.07
Sox3P53784 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.6□□□□□ -0.07
Sox3P53784 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.6□□□□□ -0.07
Sox3P53784 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox3P53784 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sox3P53784 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sox3P53784 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Sox3P53784 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox3P53784 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.6□□□□□ -0.07
Sox3P53784 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sox3P53784 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox3P53784 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox3P53784 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Sox3P53784 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox3P53784 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sox3P53784 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sox3P53784 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox3P53784 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox3P53784 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox3P53784 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox3P53784 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sox3P53784 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox3P53784 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sox3P53784 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.59□□□□□ -0.07
Sox3P53784 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.59□□□□□ -0.07
Sox3P53784 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.59□□□□□ -0.07
Sox3P53784 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.59□□□□□ -0.07
Sox3P53784 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.59□□□□□ -0.07
Sox3P53784 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sox3P53784 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.59□□□□□ -0.07
Sox3P53784 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox3P53784 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox3P53784 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox3P53784 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox3P53784 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox3P53784 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sox3P53784 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Sox3P53784 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Sox3P53784 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox3P53784 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox3P53784 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Sox3P53784 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox3P53784 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox3P53784 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sox3P53784 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox3P53784 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sox3P53784 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Sox3P53784 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sox3P53784 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.58□□□□□ -0.08
Sox3P53784 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.58□□□□□ -0.08
Sox3P53784 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox3P53784 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox3P53784 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox3P53784 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox3P53784 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sox3P53784 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sox3P53784 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sox3P53784 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox3P53784 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox3P53784 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.58□□□□□ -0.08
Sox3P53784 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.58□□□□□ -0.08
Sox3P53784 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox3P53784 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox3P53784 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox3P53784 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox3P53784 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sox3P53784 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.58□□□□□ -0.08
Sox3P53784 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.58□□□□□ -0.08
Sox3P53784 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox3P53784 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox3P53784 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox3P53784 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sox3P53784 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sox3P53784 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms