Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
GdnfP48540 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GdnfP48540 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GdnfP48540 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GdnfP48540 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
GdnfP48540 Efs-202ENSMUST00000227037 2540 ntBASIC13.38□□□□□ -0.27
GdnfP48540 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
GdnfP48540 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
GdnfP48540 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.38□□□□□ -0.27
GdnfP48540 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
GdnfP48540 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GdnfP48540 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GdnfP48540 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GdnfP48540 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.38□□□□□ -0.27
GdnfP48540 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.38□□□□□ -0.27
GdnfP48540 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
GdnfP48540 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GdnfP48540 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GdnfP48540 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GdnfP48540 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
GdnfP48540 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GdnfP48540 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GdnfP48540 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
GdnfP48540 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
GdnfP48540 AC130671.1-201ENSMUST00000227384 1237 ntBASIC13.38□□□□□ -0.27
GdnfP48540 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
GdnfP48540 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GdnfP48540 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GdnfP48540 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GdnfP48540 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
GdnfP48540 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GdnfP48540 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GdnfP48540 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GdnfP48540 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
GdnfP48540 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
GdnfP48540 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GdnfP48540 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.37□□□□□ -0.27
GdnfP48540 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GdnfP48540 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GdnfP48540 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GdnfP48540 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GdnfP48540 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GdnfP48540 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
GdnfP48540 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
GdnfP48540 Gm12134-201ENSMUST00000122109 520 ntBASIC13.37□□□□□ -0.27
GdnfP48540 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.37□□□□□ -0.27
GdnfP48540 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GdnfP48540 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.37□□□□□ -0.27
GdnfP48540 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GdnfP48540 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GdnfP48540 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GdnfP48540 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GdnfP48540 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
GdnfP48540 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GdnfP48540 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GdnfP48540 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
GdnfP48540 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GdnfP48540 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GdnfP48540 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
GdnfP48540 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GdnfP48540 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GdnfP48540 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.36□□□□□ -0.27
GdnfP48540 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GdnfP48540 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
GdnfP48540 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.36□□□□□ -0.27
GdnfP48540 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GdnfP48540 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GdnfP48540 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
GdnfP48540 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GdnfP48540 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
GdnfP48540 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GdnfP48540 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
GdnfP48540 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GdnfP48540 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GdnfP48540 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
GdnfP48540 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GdnfP48540 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.36□□□□□ -0.27
GdnfP48540 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
GdnfP48540 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GdnfP48540 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
GdnfP48540 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
GdnfP48540 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.36□□□□□ -0.27
GdnfP48540 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.36□□□□□ -0.27
GdnfP48540 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GdnfP48540 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
GdnfP48540 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.36□□□□□ -0.27
GdnfP48540 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GdnfP48540 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GdnfP48540 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GdnfP48540 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GdnfP48540 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
GdnfP48540 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GdnfP48540 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
GdnfP48540 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GdnfP48540 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GdnfP48540 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.36□□□□□ -0.27
GdnfP48540 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GdnfP48540 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GdnfP48540 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GdnfP48540 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms