Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Prox1P48437 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Prox1P48437 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prox1P48437 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Prox1P48437 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prox1P48437 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prox1P48437 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prox1P48437 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Prox1P48437 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prox1P48437 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prox1P48437 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Prox1P48437 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prox1P48437 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prox1P48437 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prox1P48437 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prox1P48437 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prox1P48437 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prox1P48437 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prox1P48437 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prox1P48437 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prox1P48437 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prox1P48437 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prox1P48437 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prox1P48437 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prox1P48437 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Prox1P48437 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Prox1P48437 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prox1P48437 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.67□□□□□ -0.06
Prox1P48437 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Prox1P48437 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.67□□□□□ -0.06
Prox1P48437 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.67□□□□□ -0.06
Prox1P48437 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.67□□□□□ -0.06
Prox1P48437 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Prox1P48437 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prox1P48437 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.67□□□□□ -0.06
Prox1P48437 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prox1P48437 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prox1P48437 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Prox1P48437 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prox1P48437 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Prox1P48437 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Prox1P48437 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Prox1P48437 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prox1P48437 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Prox1P48437 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Prox1P48437 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prox1P48437 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.67□□□□□ -0.06
Prox1P48437 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prox1P48437 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Prox1P48437 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prox1P48437 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prox1P48437 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prox1P48437 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prox1P48437 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prox1P48437 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prox1P48437 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prox1P48437 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Prox1P48437 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prox1P48437 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prox1P48437 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.66□□□□□ -0.06
Prox1P48437 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prox1P48437 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Prox1P48437 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prox1P48437 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prox1P48437 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prox1P48437 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Prox1P48437 Gm10013-201ENSMUST00000106074 672 ntBASIC14.66□□□□□ -0.06
Prox1P48437 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.66□□□□□ -0.06
Prox1P48437 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Prox1P48437 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Prox1P48437 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Prox1P48437 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prox1P48437 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prox1P48437 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prox1P48437 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Prox1P48437 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.66□□□□□ -0.06
Prox1P48437 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prox1P48437 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
Prox1P48437 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prox1P48437 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prox1P48437 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Prox1P48437 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prox1P48437 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Prox1P48437 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Prox1P48437 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prox1P48437 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prox1P48437 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Prox1P48437 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prox1P48437 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Prox1P48437 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.65□□□□□ -0.06
Prox1P48437 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.65□□□□□ -0.06
Prox1P48437 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.65□□□□□ -0.06
Prox1P48437 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.65□□□□□ -0.06
Prox1P48437 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.65□□□□□ -0.06
Prox1P48437 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
Prox1P48437 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.65□□□□□ -0.06
Prox1P48437 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prox1P48437 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Prox1P48437 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prox1P48437 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms