Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Xcl1P47993 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC9.94□□□□□ -0.82
Xcl1P47993 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Xcl1P47993 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Xcl1P47993 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Xcl1P47993 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Xcl1P47993 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Xcl1P47993 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Xcl1P47993 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Xcl1P47993 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Xcl1P47993 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Xcl1P47993 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Xcl1P47993 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Xcl1P47993 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Xcl1P47993 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Xcl1P47993 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Xcl1P47993 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Xcl1P47993 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Xcl1P47993 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Xcl1P47993 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Xcl1P47993 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Xcl1P47993 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Xcl1P47993 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
Xcl1P47993 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Xcl1P47993 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Xcl1P47993 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Xcl1P47993 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Xcl1P47993 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC9.93□□□□□ -0.82
Xcl1P47993 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Xcl1P47993 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Xcl1P47993 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Xcl1P47993 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Xcl1P47993 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Xcl1P47993 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Xcl1P47993 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Xcl1P47993 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Xcl1P47993 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Xcl1P47993 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Xcl1P47993 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Xcl1P47993 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Xcl1P47993 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC9.93□□□□□ -0.82
Xcl1P47993 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC9.93□□□□□ -0.82
Xcl1P47993 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Xcl1P47993 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Xcl1P47993 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Xcl1P47993 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Xcl1P47993 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC9.93□□□□□ -0.82
Xcl1P47993 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Xcl1P47993 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Xcl1P47993 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Xcl1P47993 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Xcl1P47993 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC9.93□□□□□ -0.82
Xcl1P47993 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Xcl1P47993 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Xcl1P47993 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Xcl1P47993 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Xcl1P47993 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Xcl1P47993 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Xcl1P47993 AC166491.1-201ENSMUST00000227053 2308 ntBASIC9.93□□□□□ -0.82
Xcl1P47993 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Xcl1P47993 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Xcl1P47993 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Xcl1P47993 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Xcl1P47993 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Xcl1P47993 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Xcl1P47993 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Xcl1P47993 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Xcl1P47993 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Xcl1P47993 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Xcl1P47993 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Xcl1P47993 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Xcl1P47993 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Xcl1P47993 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Xcl1P47993 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Xcl1P47993 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Xcl1P47993 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Xcl1P47993 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Xcl1P47993 Gm10655-201ENSMUST00000098658 1397 ntBASIC9.92□□□□□ -0.82
Xcl1P47993 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Xcl1P47993 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC9.92□□□□□ -0.82
Xcl1P47993 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC9.92□□□□□ -0.82
Xcl1P47993 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Xcl1P47993 AC166574.6-201ENSMUST00000227889 1806 ntBASIC9.92□□□□□ -0.82
Xcl1P47993 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Xcl1P47993 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Xcl1P47993 Gm27000-201ENSMUST00000182943 842 ntBASIC9.92□□□□□ -0.82
Xcl1P47993 Mir6349-201ENSMUST00000184059 97 ntBASIC9.92□□□□□ -0.82
Xcl1P47993 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC9.92□□□□□ -0.82
Xcl1P47993 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Xcl1P47993 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
Xcl1P47993 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Xcl1P47993 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Xcl1P47993 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Xcl1P47993 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Xcl1P47993 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC9.92□□□□□ -0.82
Xcl1P47993 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Xcl1P47993 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Xcl1P47993 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Xcl1P47993 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Xcl1P47993 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms